RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
CTSB-214ENST00000527243 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
CTSB-214ENST00000527243 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
CTSB-214ENST00000527243 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
CTSB-214ENST00000527243 HEYLQ9NQ87 328 aaPredicted RBP8.49□□□□□ -1.05
CTSB-214ENST00000527243 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
CTSB-214ENST00000527243 UBE2L5PA0A1B0GUS4 154 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 RBFOX3A6NFN3 312 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 OR2T8A6NH00 312 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 IFNA10P01566 189 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 CTSGP08311 255 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 C8orf88P0DMB2 117 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 FOLR2P14207 255 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 GP9P14770 177 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 HOXA1P49639 335 aaPredicted RBP8.48□□□□□ -1.05
CTSB-214ENST00000527243 PPT1P50897 306 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 FAM106AQ4KMX7 169 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 Q8N1Y9 231 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 OR2K2Q8NGT1 345 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 SFT2D1Q8WV19 159 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 TMEM170AQ8WVE7 144 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 TMEM190Q8WZ59 177 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 TXN2Q99757 166 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
CTSB-214ENST00000527243 DNAH9Q9NYC9 4486 aa8.48□□□□□ -1.05
CTSB-214ENST00000527243 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 NDUFS6O75380 124 aaKnown RBP8.47□□□□□ -1.05
CTSB-214ENST00000527243 ADCYAP1P18509 176 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 FGF7P21781 194 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 MFAP4P55083 255 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 ELLP55199 621 aaPredicted RBP8.47□□□□□ -1.05
CTSB-214ENST00000527243 DLK1P80370 383 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
CTSB-214ENST00000527243 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 KHDC3LQ587J8 217 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 DEFB121Q5J5C9 76 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 ZNF506Q5JVG8 444 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
CTSB-214ENST00000527243 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
CTSB-214ENST00000527243 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 FNDC10F2Z333 226 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 NDUFA4O00483 81 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 TSPAN4O14817 238 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 CBLN1P23435 193 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 FHITP49789 147 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 RAB31Q13636 194 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 PMS2P11Q13670 270 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 RHEBQ15382 184 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 ACOT6Q3I5F7 207 aaPredicted RBP8.46□□□□□ -1.06
CTSB-214ENST00000527243 CD300EQ496F6 205 aaPredicted RBP8.46□□□□□ -1.06
CTSB-214ENST00000527243 TM4SF20Q53R12 229 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 CACNG8Q8WXS5 425 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 RSG1Q9BU20 258 aa8.46□□□□□ -1.06
CTSB-214ENST00000527243 ACTR3CQ9C0K3 210 aaPredicted RBP8.46□□□□□ -1.06
CTSB-214ENST00000527243 GAR1Q9NY12 217 aaKnown RBP8.46□□□□□ -1.06
CTSB-214ENST00000527243 TECRQ9NZ01 308 aaKnown RBP8.46□□□□□ -1.06
CTSB-214ENST00000527243 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 C15orf62A8K5M9 175 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
CTSB-214ENST00000527243 CORTO00230 105 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTSB-214ENST00000527243 MLANAQ16655 118 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 GUCA2BQ16661 112 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 Q56UQ5 140 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 LCN12Q6JVE5 192 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 ATRAIDQ6UW56 229 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 RPRMQ9NS64 109 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 SLC39A9Q9NUM3 307 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 MLXQ9UH92 298 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
CTSB-214ENST00000527243 ZNF320A2RRD8 509 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 A8MZ25 164 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 K7EMT4 169 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 IFNA4P05014 189 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 NPY1RP25929 384 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 NPBWR1P48145 328 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 FFAR4Q5NUL3 377 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 OR4X1Q8NH49 305 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 RNASEH2CQ8TDP1 164 aaKnown RBP8.44□□□□□ -1.06
CTSB-214ENST00000527243 SCRT1Q9BWW7 348 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 NPCDR1Q9BY65 106 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 MANBALQ9NQG1 85 aa8.44□□□□□ -1.06
CTSB-214ENST00000527243 DAZ1Q9NQZ3 744 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms