RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 C11orf68Q9H3H3 251 aaKnown RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 C14orf132Q9NPU4 83 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 FKBP14Q9NWM8 211 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TAS2R7Q9NYW3 318 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 ORMDL1Q9P0S3 153 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 C3orf18Q9UK00 162 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TNFSF18Q9UNG2 199 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 C15orf41Q9Y2V0 281 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 XIRP1Q702N8 1843 aaKnown RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 NBPF19A0A087WUL8 3843 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 CAMSAP1Q5T5Y3 1602 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 USF3Q68DE3 2245 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 UNC13BO14795 1591 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 FAT1Q14517 4588 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 RYR3Q15413 4870 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 NCOA1Q15788 1441 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 PHIPQ8WWQ0 1821 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 A0A087WSZ3 146 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 TRBV30A0A0K0K1B3 111 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 A0A1B0GV50 99 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 TCRBV4S1A1TA0A5B7 111 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 C7orf71A4D174 169 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SMIM9A6NGZ8 99 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 EEF1E1-BLOC1S5C9J1V9 151 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 HSBP1L1C9JCN9 74 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 JMJD7-PLA2G4BH0Y9G9 81 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 LY6G6CO95867 125 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 IFNA10P01566 189 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 IGLV1-51P01701 117 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 HLA-DRB1P01911 266 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 OR4E1P0C645 316 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 PET100P0DJ07 73 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SMIM10L2AP0DMW4 78 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SMIM10L2BP0DMW5 78 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 UCHL3P15374 230 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 KDELR1P24390 212 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 RPL5P46777 297 aaKnown RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 UBE2G2P60604 165 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 RPS20P60866 119 aaKnown RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SNRPD2P62316 118 aaKnown RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 MED21Q13503 144 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 PMAIP1Q13794 54 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 BATFQ16520 125 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 Q5BKY6 102 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 CLVS2Q5SYC1 327 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 CD200R1LQ6Q8B3 271 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 LRRN1Q6UXK5 716 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 DPPA3Q6W0C5 159 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SLC51BQ86UW2 128 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 ST6GALNAC3Q8NDV1 305 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 OR10AC1Q8NH08 325 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 OPTNQ96CV9 577 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 GINS4Q9BRT9 223 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 CCDC94Q9BW85 323 aaPredicted RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 C20orf27Q9GZN8 174 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 TMEM126AQ9H061 195 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 TMEM133Q9H2Q1 129 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 RNF122Q9H9V4 155 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 UCK1Q9HA47 277 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 PROK2Q9HC23 129 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 BCL2L10Q9HD36 194 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 OSTCQ9NRP0 149 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SLC39A9Q9NUM3 307 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 C14orf105Q9NVL8 296 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 NHP2Q9NX24 153 aaKnown RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 IDI2-AS1Q9NZ38 188 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 MRPL27Q9P0M9 148 aaKnown RBP-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 SLC35A3Q9Y2D2 325 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 TMEM56-RWDD3S4R434 201 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 WDR97A6NE52 1622 aa-0.28□□□□□ -2.45
CSDE1-210ENST00000525878 PIK3C2GO75747 1445 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 C9orf84Q5VXU9 1444 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 DNAH6Q9C0G6 4158 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 LAMA5O15230 3695 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 EVC2Q86UK5 1308 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 A0A087X0T9 212 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 TRAV10A0A0B4J240 114 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 TRAV26-2A0A0B4J265 109 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PQLC2LA1A4F0 135 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 GOLGA8KD6RF30 607 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 E7EUB6 86 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 M0QZ92 97 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PFDN6O15212 129 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 GADD45GO95257 159 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 AHSA1O95433 338 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PPYP01298 95 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 CD2P06729 351 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 RPS12P25398 132 aaKnown RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 SRIP30626 198 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 MAGEA2P43356 314 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 DSCR4P56555 118 aaPredicted RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 FXYD6P3P58550 94 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 RPL37P61927 97 aaKnown RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 DYNLT1P63172 113 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 OR2F1Q13607 317 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 CDKL4Q5MAI5 379 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 ANGPTL5Q86XS5 388 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms