RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
LRRK1-202ENST00000525284 COLCA2A8K830 154 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
LRRK1-202ENST00000525284 MCM3APO60318 1980 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 IGFBP3P17936 291 aaPredicted RBP11.29□□□□□ -0.6
LRRK1-202ENST00000525284 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 ANKRD29Q8N6D5 301 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
LRRK1-202ENST00000525284 FGF6P10767 208 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 SLAQ13239 276 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 IGKV1-8A0A0C4DH67 115 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 PRSS57Q6UWY2 283 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 A0A1W2PR77 199 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 A8MWP6 167 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 COX6A1P12074 109 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
LRRK1-202ENST00000525284 CTSBP07858 339 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 PYY3Q5JQD4 70 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 LOC102723996A0A087X1L8 192 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 TIMM23O14925 209 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 IGHV2OR16-5A0A0B4J2B6 119 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 MORN2Q502X0 79 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
LRRK1-202ENST00000525284 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 MPZP25189 248 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
LRRK1-202ENST00000525284 AZU1P20160 251 aa11.27□□□□□ -0.6
LRRK1-202ENST00000525284 FBLIM1Q8WUP2 373 aa11.27□□□□□ -0.6
LRRK1-202ENST00000525284 GAGE7O76087 117 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 GAGE12FP0CL80 117 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 GAGE12GP0CL81 117 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 GAGE12IP0CL82 117 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 SLC25A16P16260 332 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 SHISA3A0PJX4 238 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 PSG7Q13046 419 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 J3QW42 95 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 GAS1P54826 345 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 LIME1Q9H400 295 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 TRBV6-7A0A0A0MS04 114 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 YPEL1O60688 119 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 CELA3BP08861 270 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 YPEL2Q96QA6 119 aa11.27□□□□□ -0.61
LRRK1-202ENST00000525284 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 CELA3AP09093 270 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 CFHR3Q02985 330 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 C9orf118A6NHY6 69 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 LYNX1G3V0Z9 82 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 IL18BPO95998 194 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 LYNX1P0DP58 116 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 TMEM219Q86XT9 240 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 SLC22A18ASQ8N1D0 253 aa11.26□□□□□ -0.61
LRRK1-202ENST00000525284 F8W1H4 67 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 IGKV1D-43A0A0B4J1Z2 117 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 C17orf100A8MU93 164 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 TMEM243Q9BU79 118 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 ZFC3H1O60293 1989 aaKnown RBP11.25□□□□□ -0.61
LRRK1-202ENST00000525284 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
LRRK1-202ENST00000525284 H0YIZ8 118 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 K7EP13 123 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 DAD1P61803 113 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
LRRK1-202ENST00000525284 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 CABIN1Q9Y6J0 2220 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 IGHG2P01859 326 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 KLRD1Q13241 179 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
LRRK1-202ENST00000525284 NCOR1P1Q9H4R4 102 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.24□□□□□ -0.61
LRRK1-202ENST00000525284 SHISA9B4DS77 424 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 CRYGCP07315 174 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
LRRK1-202ENST00000525284 FGF16O43320 207 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 SP9P0CG40 484 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 AGMATQ9BSE5 352 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 NPSP0C0P6 89 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms