RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SCRT2Q9NQ03 307 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 RNF11Q9Y3C5 154 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 CSAG2Q9Y5P2 127 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 LOC285556D6RIA3 1793 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 LAMA3Q16787 3333 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 DENND4CQ5VZ89 1909 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 NCOR1O75376 2440 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 MUC6Q6W4X9 2439 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 A0A0G2JMZ2 1700 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 A8MWL6 223 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 A8MWP6 167 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 I3L521 148 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 ZNF324O75467 553 aaPredicted RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 ELK1P19419 428 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 CRYGSP22914 178 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 RPL22P35268 128 aaKnown RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 CRISP3P54108 245 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 TAS2R45P59539 299 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 RHOGP84095 191 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 FAAP20Q6NZ36 180 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 SSX8Q7RTT4 187 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 ZNF329Q86UD4 541 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 NR2C2APQ86WQ0 139 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 C4orf33Q8N1A6 199 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 C10orf126Q8N4M7 172 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 C11orf42Q8N5U0 333 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 SDF2Q99470 211 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 MRPL57Q9BQC6 102 aaKnown RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 KLK5Q9Y337 293 aaPredicted RBP3.16□□□□□ -1.9
CD44-213ENST00000525209 LOXHD1Q8IVV2 1947 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 PLXNB3Q9ULL4 1909 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 VCANP13611 3396 aa3.16□□□□□ -1.9
CD44-213ENST00000525209 MYH4Q9Y623 1939 aa3.15□□□□□ -1.9
CD44-213ENST00000525209 DOCK4Q8N1I0 1966 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 IGHV5-51A0A0C4DH38 117 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 A0A0D9SEW6 157 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 IGHV5-10-1A0A0J9YXX1 117 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 ODAMA1E959 279 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 BUB1B-PAK6H3BSN5 160 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 CST7O76096 145 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 PRM2P04554 102 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 ZNF688P0C7X2 276 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 FABP2P12104 132 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
CD44-213ENST00000525209 MEF2BQ02080 365 aaPredicted RBP3.15□□□□□ -1.91
CD44-213ENST00000525209 COL5A1-AS1Q5SY13 56 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 AADACL3Q5VUY0 350 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 Q8N377 158 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 ZNF525Q8N782 197 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 C1orf147Q96MC9 270 aaPredicted RBP3.15□□□□□ -1.91
CD44-213ENST00000525209 TBL1YQ9BQ87 522 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 SHANK2-AS3Q9BTD1 123 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 DERL1Q9BUN8 251 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 C1QTNF6Q9BXI9 259 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 ZNF580Q9UK33 172 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 FUT9Q9Y231 359 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 NLRC5Q86WI3 1866 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 FANCMQ8IYD8 2048 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 DSPPQ9NZW4 1301 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 ATG2AQ2TAZ0 1938 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 MYO10Q9HD67 2058 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 CACNA1GO43497 2377 aa3.15□□□□□ -1.91
CD44-213ENST00000525209 NUP210LQ5VU65 1888 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 IGHV3-43A0A0B4J1X8 118 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 C1orf196B1AJZ1 125 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 TMEM256-PLSCR3K7ERE1 68 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 BPY2O14599 106 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 CDC42EP2O14613 210 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 SNAPC5O75971 98 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 NAPSAO96009 420 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 HIST1H1DP16402 221 aaKnown RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 UBE2AP49459 152 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 LINC00205P59089 165 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 GNB2P62879 340 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 PLGLB1Q02325 96 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 LGALS9BQ3B8N2 356 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 HSD17B12Q53GQ0 312 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 TRAPPC6BQ86SZ2 158 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 TMEM256Q8N2U0 113 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 PACRGLQ8N7B6 248 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 DAND5Q8N907 189 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 OR5D14Q8NGL3 314 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 OR10AC1Q8NH08 325 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 STAG3L4Q8TBR4 150 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 NAT14Q8WUY8 206 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 DEDD2Q8WXF8 326 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 TMEM158Q8WZ71 300 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 SLC25A46Q96AG3 418 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms