RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ASIPP42127 132 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 Q6ZR03 302 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 HS3ST6Q96QI5 342 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 A8MWP6 167 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 AMBPP02760 352 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 ZNF324O75467 553 aaPredicted RBP13.92□□□□□ -0.18
BEST1-203ENST00000524877 NBEAP1P0C6P0 100 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 MGST2Q99735 147 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 ZNF843Q8N446 348 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 TRGV2A0A075B6R0 118 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 TCF24Q7RTU0 167 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 ZNF664Q8N3J9 261 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 SDF2L1Q9HCN8 221 aa13.92□□□□□ -0.18
BEST1-203ENST00000524877 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
BEST1-203ENST00000524877 SIGLEC15Q6ZMC9 328 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 ZNF329Q86UD4 541 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
BEST1-203ENST00000524877 ACACAQ13085 2346 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 ZNF503-AS2A6NEH8 195 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 MDC1Q14676 2089 aaKnown RBP13.91□□□□□ -0.18
BEST1-203ENST00000524877 DKK1O94907 266 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 FHL1Q13642 323 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 DPH3Q96FX2 82 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 RIF1Q5UIP0 2472 aaKnown RBP13.91□□□□□ -0.18
BEST1-203ENST00000524877 FAM186AA6NE01 2351 aa13.91□□□□□ -0.18
BEST1-203ENST00000524877 FAM74A4Q5TZK3 123 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 Q8NA96 180 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 OR11H12B2RN74 326 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 OR11H1Q8NG94 326 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 OR11H2Q8NH07 326 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 VENTXO95231 258 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 DNAL4O96015 105 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 C9JCJ5 164 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 SERF1AO75920 110 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 TFF3Q07654 80 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 SLAQ13239 276 aa13.9□□□□□ -0.18
BEST1-203ENST00000524877 ERVK11-1P61568 191 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 H7C1H1 209 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 NAPSAO96009 420 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 GFI1BQ5VTD9 330 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 PLXND1Q9Y4D7 1925 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 TRAV8-6A0A0B4J262 113 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 SMIM20Q8N5G0 67 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 HSD52Q0P140 79 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 UBE2DNLQ8IWF7 75 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 SDK2Q58EX2 2172 aa13.89□□□□□ -0.19
BEST1-203ENST00000524877 LINC01619G3V211 115 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 CRYBB3P26998 211 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 GFI1Q99684 422 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 SNHG12Q9BXW3 62 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
BEST1-203ENST00000524877 TRAV8-1A0A0A6YYK1 113 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 HOXA3O43365 443 aaPredicted RBP13.88□□□□□ -0.19
BEST1-203ENST00000524877 SIGLEC9Q9Y336 463 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 PRSS2P07478 247 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 FAM110DQ8TAY7 271 aaPredicted RBP13.88□□□□□ -0.19
BEST1-203ENST00000524877 CHTOPQ9Y3Y2 248 aaKnown RBP13.88□□□□□ -0.19
BEST1-203ENST00000524877 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
BEST1-203ENST00000524877 POU2AF1Q16633 256 aa13.88□□□□□ -0.19
BEST1-203ENST00000524877 TCF23Q7RTU1 214 aa13.87□□□□□ -0.19
BEST1-203ENST00000524877 GAGE5Q13069 117 aa13.87□□□□□ -0.19
BEST1-203ENST00000524877 GAGE6Q13070 117 aa13.87□□□□□ -0.19
BEST1-203ENST00000524877 SRSF8Q9BRL6 282 aaKnown RBP13.87□□□□□ -0.19
BEST1-203ENST00000524877 LOXP28300 417 aaPredicted RBP13.87□□□□□ -0.19
BEST1-203ENST00000524877 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 RNF138Q8WVD3 245 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 SPANXCQ9NY87 97 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 OVOL1O14753 267 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 CKS2P33552 79 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 C1orf122Q6ZSJ8 110 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 FMC1Q96HJ9 113 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 OTORQ9NRC9 128 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 NTF4P34130 210 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 IGHV4-30-2A0A087WSY4 118 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 GCSAMLQ5JQS6 135 aa13.86□□□□□ -0.19
BEST1-203ENST00000524877 SDHCQ99643 169 aaPredicted RBP13.86□□□□□ -0.19
BEST1-203ENST00000524877 MRPS16Q9Y3D3 137 aaKnown RBP13.86□□□□□ -0.19
BEST1-203ENST00000524877 TRAV9-1A0A075B6T8 112 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 IGHV4-39P01824 125 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 SRP19P09132 144 aaKnown RBP13.85□□□□□ -0.19
BEST1-203ENST00000524877 FER1L6-AS1Q8NA97 138 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 IMMP2LQ96T52 175 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 TMEM250H0YL14 139 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 OBSL1O75147 1896 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 AZU1P20160 251 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 LCN12Q6JVE5 192 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 FAM19A2Q8N3H0 131 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 Q9H3A6 140 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
BEST1-203ENST00000524877 C10orf55Q5SWW7 151 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 MRAPQ8TCY5 172 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 PGLYRP4Q96LB8 373 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms