RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 POLDIP2Q9Y2S7 368 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1B0GW15 77 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1W2PPC4 97 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
CSMD1-213ENST00000523488 GRPP07492 148 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 CACNG7P62955 275 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 TAL2Q16559 108 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 LINC00696Q6ZRV3 163 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 YRDCQ86U90 279 aaKnown RBP6.77□□□□□ -1.33
CSMD1-213ENST00000523488 FAM173AQ9BQD7 235 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 RTL8AQ9BWD3 113 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 RPP21Q9H633 154 aaKnown RBP6.77□□□□□ -1.33
CSMD1-213ENST00000523488 MED13LQ71F56 2210 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 OOEPA6NGQ2 149 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 C15orf61A6NNL5 157 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 LINC00473A8K010 186 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 CGB3P0DN86 165 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 CGB7P0DN87 165 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 KIR2DS2P43631 304 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF479Q96JC4 524 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 KLRC4-KLRK1H3BQV0 150 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 SPINT2O43291 252 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 DEFB123Q8N688 67 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 THAP8Q8NA92 274 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF418Q8TF45 676 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-213ENST00000523488 SLC25A33Q9BSK2 321 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 H3BMG7 143 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 APOMO95445 188 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 RBPMS2Q6ZRY4 209 aaKnown RBP6.76□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF414Q96IQ9 312 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 hADV38S2A0JD32 116 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 K7ERJ3 54 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 SCRG1O75711 98 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 COL8A1P27658 744 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 C2orf83Q53S99 150 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
CSMD1-213ENST00000523488 PPP1R32Q7Z5V6 425 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-213ENST00000523488 TMEM140Q9NV12 185 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 OCIAD1Q9NX40 245 aa6.76□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1W2PRD5 423 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1W2PRF3 423 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1W2PRM7 423 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 CD27P26842 260 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 GATA4P43694 442 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 RNF183Q96D59 192 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 HCFC1P51610 2035 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 IGKV1OR2-108A0A075B7D4 117 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 TRAV5A0A0B4J249 113 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 B5MCH6 92 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 NCR2O95944 276 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 IGHV3-13P01766 116 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 GNG5P63218 68 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 EDDM3AQ14507 147 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 PCP2Q8IVA1 136 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 TRAV3A0A0B4J244 114 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 ARL3P36405 182 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 GAGE5Q13069 117 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 GAGE6Q13070 117 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 OR1L8Q8NGR8 309 aa6.75□□□□□ -1.33
CSMD1-213ENST00000523488 PATE3B3GLJ2 98 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PYYP10082 97 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 HERV-K104P63124 156 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 RIGQ13278 110 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PKDREJQ9NTG1 2253 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 WI2-2373I1.2A0A1W2PRP0 233 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PGPA6NDG6 321 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PRR33A8MZF0 331 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 KLK10O43240 276 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 HSPE1P61604 102 aaKnown RBP6.74□□□□□ -1.33
CSMD1-213ENST00000523488 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
CSMD1-213ENST00000523488 KLRD1Q13241 179 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PDPNQ86YL7 162 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 RBMXL3Q8N7X1 1067 aaKnown RBP6.74□□□□□ -1.33
CSMD1-213ENST00000523488 RND1Q92730 232 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 CITED1Q99966 193 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 KLF13Q9Y2Y9 288 aaPredicted RBP6.74□□□□□ -1.33
CSMD1-213ENST00000523488 TANC2Q9HCD6 1990 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 FXYD2P54710 66 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 FOXF2Q12947 444 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 PCOLCEQ15113 449 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 C3AR1Q16581 482 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 C11orf53Q8IXP5 236 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 RPRMLQ8N4K4 120 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 ITLN1Q8WWA0 313 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 IMMP1LQ96LU5 166 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
CSMD1-213ENST00000523488 NDUFS7O75251 213 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 CCL3P10147 92 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 SHISA2Q6UWI4 295 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms