RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
SDCBP-211ENST00000523441 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 ISLRO14498 428 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 RCVRNP35243 200 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-211ENST00000523441 SPCS3P61009 180 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 RHOBP62745 196 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 FGL1Q08830 312 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 ICAM4Q14773 271 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 MEF2DQ14814 521 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 ETFRF1Q6IPR1 90 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 AMTNQ6UX39 209 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 RNASEH2CQ8TDP1 164 aaKnown RBP8.03□□□□□ -1.12
SDCBP-211ENST00000523441 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 PPP1R14DQ9NXH3 145 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 PFDN2Q9UHV9 154 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
SDCBP-211ENST00000523441 CRXO43186 299 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-211ENST00000523441 ZNF182P17025 639 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-211ENST00000523441 NUP62P37198 522 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-211ENST00000523441 UCP3P55916 312 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 SUPT4H1P63272 117 aaKnown RBP8.02□□□□□ -1.13
SDCBP-211ENST00000523441 IZUMO2Q6UXV1 221 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 Q6ZSN1 163 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 RSG1Q9BU20 258 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-211ENST00000523441 COPZ2Q9P299 210 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 CACNG5Q9UF02 275 aa8.02□□□□□ -1.13
SDCBP-211ENST00000523441 GAGE12BA1L429 117 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 GAGE7O76087 117 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 GAGE12FP0CL80 117 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 GAGE12GP0CL81 117 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 GAGE12IP0CL82 117 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 HOXA5P20719 270 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 UCP1P25874 307 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 KLF9Q13886 244 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-211ENST00000523441 SLC25A32Q9H2D1 315 aa8.01□□□□□ -1.13
SDCBP-211ENST00000523441 A0A1W2PPQ1 181 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 ZNF701M0R085 212 aaPredicted RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 DUSP14O95147 198 aaKnown RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 M6PRP20645 277 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 LSM3P62310 102 aaKnown RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 HIST1H1AQ02539 215 aaPredicted RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 SCGB2B2Q4G0G5 96 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 OR8G2PQ6IF36 304 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 TMEM144Q7Z5S9 345 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 ZNF738Q8NE65 137 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 RXFP4Q8TDU9 374 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 GPX8Q8TED1 209 aa8□□□□□ -1.13
SDCBP-211ENST00000523441 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 MRPS16Q9Y3D3 137 aaKnown RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 TIMM8BQ9Y5J9 83 aaPredicted RBP8□□□□□ -1.13
SDCBP-211ENST00000523441 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 OR5AC1P0C628 307 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 TSPOP30536 169 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 GALR1P47211 349 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 RND3P61587 244 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 NEDD8Q15843 81 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-211ENST00000523441 GPR141Q7Z602 305 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 CCDC71LQ8N9Z2 235 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 LHFPL5Q8TAF8 219 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 C16orf74Q96GX8 76 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 COMMD3Q9UBI1 195 aa7.99□□□□□ -1.13
SDCBP-211ENST00000523441 SMIM31A0A1B0GVY4 71 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 SNRPGP15A8MWD9 76 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 GABARAPH6UMI1 98 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 GABARAPO95166 117 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 GCSHP23434 173 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 GABARAPL2P60520 117 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 B2MP61769 119 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 RNASE10Q5GAN6 216 aaKnown RBP7.98□□□□□ -1.13
SDCBP-211ENST00000523441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 OR13C8Q8NGS7 320 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 MARCH1Q8TCQ1 289 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 ZNF486Q96H40 463 aaPredicted RBP7.98□□□□□ -1.13
SDCBP-211ENST00000523441 SLC35E1Q96K37 410 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 UPK3BQ9BT76 320 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
SDCBP-211ENST00000523441 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 A0A087WTM6 91 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 A0A096LPF7 62 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 TEX13DA0A0J9YY54 714 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-211ENST00000523441 J3KRW8 73 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 SIVA1O15304 175 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 TNFAIP8O95379 198 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 RPS19P39019 145 aaKnown RBP7.97□□□□□ -1.13
SDCBP-211ENST00000523441 MEOX2P50222 304 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 TAS2R60P59551 318 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 GAMTQ14353 236 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 C1orf194Q5T5A4 169 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 TMEM268Q5VZI3 342 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 SELENOHQ8IZQ5 122 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms