RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KRTAP27-1Q3LI81 207 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 TUBA4BQ9H853 241 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 WNK1Q9H4A3 2382 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 ABCA2Q9BZC7 2435 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 SHISA9B4DS77 424 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 TCF24Q7RTU0 167 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 RUSC1-AS1Q66K80 236 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 C9JCJ5 164 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 PF4P02776 101 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 TSPOP30536 169 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 CTAG1AP78358 180 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 SP5Q6BEB4 398 aaPredicted RBP10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 EXOC3-AS1Q8N2X6 119 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 TNCP24821 2201 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 TRBV9A0A0B4J1U6 114 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 Q6ZSR3 168 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 KLK15Q9H2R5 256 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 CDC42EP3Q9UKI2 254 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 LAMA3Q16787 3333 aa10.59□□□□□ -0.71
PCDHGB1-201ENST00000523390 SRD5A1P18405 259 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 VDAC2P45880 294 aaPredicted RBP10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 PAX8Q06710 450 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 FAM71F2Q6NXP2 309 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF329Q86UD4 541 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 C1QL4Q86Z23 238 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 CIARTQ8N365 385 aaPredicted RBP10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 NCOR1P1Q9H4R4 102 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 TMEM14BQ9NUH8 114 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 BEND2Q8NDZ0 799 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 OR5AN1Q8NGI8 311 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 TRGV9Q99603 122 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
PCDHGB1-201ENST00000523390 TMEM97Q5BJF2 176 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 C10orf91Q5T1B1 145 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 KLF2Q9Y5W3 355 aaPredicted RBP10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 HIVEP3Q5T1R4 2406 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 REC114Q7Z4M0 266 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 SSBP4Q9BWG4 385 aaPredicted RBP10.57□□□□□ -0.72
PCDHGB1-201ENST00000523390 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 Q1RN00 199 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 M0R143 59 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 C5orf42Q9H799 3197 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 C22orf46C9J442 243 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
PCDHGB1-201ENST00000523390 CD33P20138 364 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 NMUP48645 174 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF56Q15929 161 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 MSMPQ1L6U9 139 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 MSMBP08118 114 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 Q8NA96 180 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 IZUMO1RA6ND01 250 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 NUDT3O95989 172 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 NDPQ00604 133 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 IL15RAQ13261 267 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 CDPF1Q6NVV7 123 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 NDUFA4L2Q9NRX3 87 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
PCDHGB1-201ENST00000523390 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 FABP5P3A8MUU1 101 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 UBE2E1P51965 193 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 IGKV2-40A0A087WW87 121 aaPredicted RBP10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 IGKV2D-40P01614 121 aaPredicted RBP10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 SLC25A16P16260 332 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF562Q6V9R5 426 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 FAM19A2Q8N3H0 131 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 KAAG1Q9UBP8 84 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 A0A1B0GW64 132 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms