RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 ANKRD36CQ5JPF3 1778 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ARFGEF2Q9Y6D5 1785 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ARHGAP5Q13017 1502 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 MYH10P35580 1976 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 DEPDC5O75140 1603 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TRAV38-1A0A0B4J264 116 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TRAV4A0A0B4J268 109 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TRBV10-2A0A0K0K1G8 114 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 GGT3PA6NGU5 568 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TRAPPC2LH3BP13 241 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 H3BQF6 201 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 C19orf84I3L1E1 186 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 PIRO00625 290 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SLC22A1O15245 554 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SULT1B1O43704 296 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 PFDN1O60925 122 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SMIM24O75264 130 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ZNF737O75373 536 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 PGLYRP1O75594 196 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 OR5F1O95221 314 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 IFNA10P01566 189 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 C1QCP02747 245 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CLPSP04118 112 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 MSMBP08118 114 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HTR1AP08908 422 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 OR4E1P0C645 316 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 RPS4Y1P22090 263 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 PPIBP23284 216 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BOP23527 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 G0S2P27469 103 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SRIP30626 198 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BBP33778 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CRYBA4P53673 196 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BDP58876 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ARPC4P59998 168 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CDC42P60953 191 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 B2MP61769 119 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 AP1S1P61966 158 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H4AP62805 103 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BCP62807 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 GNGT1P63211 74 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST2H2BEQ16778 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 Q1T7F1 81 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LIN52Q52LA3 116 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LINC01554Q52M75 96 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 FAM27BQ5VT28 67 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 FAM173BQ6P4H8 233 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LCN15Q6UWW0 184 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 UNQ6190/PRO20217Q6UXQ8 127 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 Q6ZQT0 140 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 GOLT1AQ6ZVE7 132 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LCA10Q71F78 164 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SLC36A1Q7Z2H8 476 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SLC35E3Q7Z769 313 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TMED4Q7Z7H5 227 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LYG2Q86SG7 212 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 DHFR2Q86XF0 187 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 EXOC3-AS1Q8N2X6 119 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 C3orf56Q8N813 242 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 OR8B3Q8NGG8 313 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SLC25A40Q8TBP6 338 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 STAG3L4Q8TBR4 150 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 WFDC5Q8TCV5 224 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 GNPDA2Q8TDQ7 276 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 C11orf40Q8WZ69 217 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BHQ93079 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TMEM106AQ96A25 262 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ADAT3Q96EY9 351 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 CEP19Q96LK0 163 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BNQ99877 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 HIST1H2BMQ99879 126 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CMSS1Q9BQ75 279 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 SELENOSQ9BQE4 189 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 DOHHQ9BU89 302 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 CCDC90BQ9GZT6 254 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 SH3BGRL3Q9H299 93 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 BOLA2Q9H3K6 86 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ENY2Q9NPA8 101 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TVP23BQ9NYZ1 205 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 OPTCQ9UBM4 332 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 PRNDQ9UKY0 176 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 PAIP2BQ9ULR5 123 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 BAIAP2Q9UQB8 552 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LHFPL6Q9Y693 200 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 MYO18AQ92614 2054 aaKnown RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 TIAM2Q8IVF5 1701 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 NALCNQ8IZF0 1738 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 NWD2Q9ULI1 1742 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 RTL1A6NKG5 1358 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 KIF24Q5T7B8 1368 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ATP10BO94823 1461 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 A2MP01023 1474 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ERVK-7P63135 1459 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ZNF518AQ6AHZ1 1483 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 NEO1Q92859 1461 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 MAGI1Q96QZ7 1491 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 FANCD2Q9BXW9 1451 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms