RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ATP5G3P48201 142 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 CD81P60033 236 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 MEF2BQ02080 365 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 USF2Q15853 346 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 ESM1Q9NQ30 184 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 IGHV3OR16-8A0A075B7F1 116 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 PPP5D1E7EU14 171 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 UBE2L3P68036 154 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 OR4F5Q8NH21 305 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 OR4F4Q96R69 305 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 SLC25A39Q9BZJ4 359 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 MRPL27Q9P0M9 148 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 C11orf94C9JXX5 98 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 TGOLN2O43493 480 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 BRI3O95415 125 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 RAB9AP51151 201 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF414Q96IQ9 312 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 PAXXQ9BUH6 204 aa11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 GAR1Q9NY12 217 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-236ENST00000522792 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 OR2C1O95371 312 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 SRD5A1P18405 259 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 SOHLH1Q5JUK2 328 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
CTNNA1-236ENST00000522792 TRBV12-3P01733 135 aa11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 IGHG4P01861 327 aa11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 USMG5Q96IX5 58 aa11.96□□□□□ -0.5
CTNNA1-236ENST00000522792 FAM74A7A6NL05 159 aa11.95□□□□□ -0.5
CTNNA1-236ENST00000522792 PSMB8P28062 276 aa11.95□□□□□ -0.5
CTNNA1-236ENST00000522792 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
CTNNA1-236ENST00000522792 H3BRN7 92 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 FXYD5Q96DB9 178 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 CD99P14209 185 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 ARL3P36405 182 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 SVBPQ8N300 66 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 OR4X2Q8NGF9 303 aa11.94□□□□□ -0.5
CTNNA1-236ENST00000522792 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 H3BTX0 84 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 GP9P14770 177 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 CTAG1AP78358 180 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 SLC35B1P78383 322 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 Q8N2B8 174 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 SERTAD4Q9NUC0 356 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 RPLP1P05386 114 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF674Q2M3X9 581 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 STXBP6Q8NFX7 210 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 CDC42EP3Q9UKI2 254 aa11.93□□□□□ -0.5
CTNNA1-236ENST00000522792 BMPR1BO00238 502 aa11.92□□□□□ -0.5
CTNNA1-236ENST00000522792 RELQ04864 619 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-236ENST00000522792 TEX38Q6PEX7 206 aa11.92□□□□□ -0.5
CTNNA1-236ENST00000522792 Q6ZSV7 163 aa11.92□□□□□ -0.5
CTNNA1-236ENST00000522792 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
CTNNA1-236ENST00000522792 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF98A6NK75 572 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 NPPCP23582 126 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 ATP6V0BQ99437 205 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 INAFM1C9JVW0 142 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 PDE6DO43924 150 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF418Q8TF45 676 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 PARLQ9H300 379 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 CUBNO60494 3623 aa11.91□□□□□ -0.5
CTNNA1-236ENST00000522792 TMEM89A2RUT3 159 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 H3BQ15 152 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 SNAPINO95295 136 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 FOXE3Q13461 319 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-236ENST00000522792 F6UZH7 168 aa11.89□□□□□ -0.51
CTNNA1-236ENST00000522792 CLDN34H7C241 214 aa11.89□□□□□ -0.51
CTNNA1-236ENST00000522792 M0R036 132 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms