RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 PYYP10082 97 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 MFAP4P55083 255 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 THYN1Q9P016 225 aa11.29□□□□□ -0.6
CLN8-204ENST00000519254 ANK3Q12955 4377 aaKnown RBP11.29□□□□□ -0.6
CLN8-204ENST00000519254 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 PRSS22Q9GZN4 317 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 FBXL7Q9UJT9 491 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
CLN8-204ENST00000519254 LYZP61626 148 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
CLN8-204ENST00000519254 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
CLN8-204ENST00000519254 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 ZNF702PQ9H963 129 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 C21orf62Q9NYP8 219 aa11.28□□□□□ -0.6
CLN8-204ENST00000519254 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 TRBV9A0A0B4J1U6 114 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 GGTLC3B5MD39 225 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 AP4M1O00189 453 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 GNG7O60262 68 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 OR2C1O95371 312 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 TOMM40O96008 361 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 FABP1P07148 127 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 HILS1P60008 231 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 YPEL3P61236 119 aaPredicted RBP11.27□□□□□ -0.61
CLN8-204ENST00000519254 ADIRFQ15847 76 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
CLN8-204ENST00000519254 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 MTORP42345 2549 aa11.27□□□□□ -0.61
CLN8-204ENST00000519254 CRLF1O75462 422 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 IGF1P05019 195 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
CLN8-204ENST00000519254 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 HIST1H2BAQ96A08 127 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 F8P00451 2351 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 CLDN34H7C241 214 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 FCGR2BP31994 310 aaPredicted RBP11.26□□□□□ -0.61
CLN8-204ENST00000519254 Q56UQ5 140 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 ZNF343Q6P1L6 599 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 VN1R17PQ8TDU5 208 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 MS4A10Q96PG2 267 aa11.26□□□□□ -0.61
CLN8-204ENST00000519254 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
CLN8-204ENST00000519254 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
CLN8-204ENST00000519254 CTSGP08311 255 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 GP9P14770 177 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
CLN8-204ENST00000519254 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
CLN8-204ENST00000519254 RHOGP84095 191 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 RNF212Q495C1 297 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 FAM24BQ8N5W8 94 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 TXN2Q99757 166 aa11.25□□□□□ -0.61
CLN8-204ENST00000519254 CXorf65A6NEN9 183 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 CRYBA1P05813 215 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 ZNF502Q8TBZ5 544 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
CLN8-204ENST00000519254 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 IL4P05112 153 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
CLN8-204ENST00000519254 CRYBB3P26998 211 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 SRSF2Q01130 221 aaKnown RBP11.23□□□□□ -0.61
CLN8-204ENST00000519254 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 CUBNO60494 3623 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 TCF21O43680 179 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 ADMP35318 185 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 MYCNOSP40205 109 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 USF2Q15853 346 aaPredicted RBP11.23□□□□□ -0.61
CLN8-204ENST00000519254 Q6ZSV7 163 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
CLN8-204ENST00000519254 AURKAIP1Q9NWT8 199 aaPredicted RBP11.23□□□□□ -0.61
CLN8-204ENST00000519254 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
CLN8-204ENST00000519254 H3BRN7 92 aa11.22□□□□□ -0.61
CLN8-204ENST00000519254 NBEAP1P0C6P0 100 aa11.22□□□□□ -0.61
CLN8-204ENST00000519254 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms