RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 WDFY3Q8IZQ1 3526 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 A0A1B0GUT8 65 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 VSTM5A8MXK1 200 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 C15orf65H3BRN8 121 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 HBDP02042 147 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 HES3Q5TGS1 186 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 PLXDC1Q8IUK5 500 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 DCTN5Q9BTE1 182 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 PGPA6NDG6 321 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 FAM90A27PA6NNH2 459 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 WNT9BO14905 357 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 COX7A2P2O60397 106 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 VEGFBP49765 207 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 SRSF1Q07955 248 aaKnown RBP eCLIP10.87□□□□□ -0.67
PABPC1-208ENST00000519004 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 Q6ZS92 163 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 FMC1Q96HJ9 113 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 RITA1Q96K30 269 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 A0A1B0GW15 77 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 NDUFS7O75251 213 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 CFHR2P36980 270 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 C10orf113Q5VZT2 155 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-208ENST00000519004 SLC25A48Q6ZT89 311 aaKnown RBP10.87□□□□□ -0.67
PABPC1-208ENST00000519004 C8orf46Q8TAG6 207 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 HHLA3Q9XRX5 114 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 PCSK5Q92824 1860 aa10.87□□□□□ -0.67
PABPC1-208ENST00000519004 A0A1W2PPC4 97 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 RBP4P02753 201 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 COL8A1P27658 744 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 Q71RC1 249 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-208ENST00000519004 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 PDPNQ86YL7 162 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 CD69Q07108 199 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 RIGQ13278 110 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 ABHD17BQ5VST6 288 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 ZFAND6Q6FIF0 208 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 OR10X1Q8NGY0 326 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
PABPC1-208ENST00000519004 IFI27L2Q9H2X8 130 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 ZMAT4Q9H898 229 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
PABPC1-208ENST00000519004 CLEC3BP05452 202 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 RND1Q92730 232 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 RNF208Q9H0X6 261 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 D6R8Y8 96 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 SPINT2O43291 252 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 DUX1O43812 170 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 MRPL33O75394 65 aaKnown RBP10.85□□□□□ -0.67
PABPC1-208ENST00000519004 GRPP07492 148 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 PRCDQ00LT1 54 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 RPS19BP1Q86WX3 136 aaKnown RBP10.85□□□□□ -0.67
PABPC1-208ENST00000519004 WFDC3Q8IUB2 231 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 CIARTQ8N365 385 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-208ENST00000519004 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 FREM1Q5H8C1 2179 aa10.85□□□□□ -0.67
PABPC1-208ENST00000519004 CHD9Q3L8U1 2897 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 BRWD1Q9NSI6 2320 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 PLAUP00749 431 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
PABPC1-208ENST00000519004 ZNF134P52741 427 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 MOGAT3Q86VF5 341 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 OR1L4Q8NGR5 311 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 TMEM133Q9H2Q1 129 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 U3KQK5 164 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 SDK2Q58EX2 2172 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 RNASE2P10153 161 aaKnown RBP10.84□□□□□ -0.67
PABPC1-208ENST00000519004 DIAPH2-AS1Q14236 149 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 HARBI1Q96MB7 349 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 CITED1Q99966 193 aa10.84□□□□□ -0.67
PABPC1-208ENST00000519004 TCRAP04437 139 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 THBDP07204 575 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 ODF1Q14990 250 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 PCOLCEQ15113 449 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 TAL2Q16559 108 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 Q86TA4 180 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 TEX29Q8N6K0 151 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 REV3LO60673 3130 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 ZNF785A8K8V0 405 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 CCDC179H3BU77 68 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 MPV17P39210 176 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 PLP2Q04941 152 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 ZNF826PQ6ZT77 177 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 KNTC1P50748 2209 aa10.83□□□□□ -0.68
PABPC1-208ENST00000519004 LMO7DNF2Z398 122 aa10.82□□□□□ -0.68
PABPC1-208ENST00000519004 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
PABPC1-208ENST00000519004 MEOX1P50221 254 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms