RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 NXNL2Q5VZ03 156 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 PPP1R2P3Q6NXS1 205 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 FAM231DQ6ZW35 169 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 OR8J2Q8NGG1 315 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 TWIST2Q8WVJ9 160 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 SRSF12Q8WXF0 261 aaKnown RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 L3HYPDHQ96EM0 354 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 CHMP6Q96FZ7 201 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 MRPL48Q96GC5 212 aaKnown RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 DERL3Q96Q80 235 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 ADAT1Q9BUB4 502 aaKnown RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 OR2H1Q9GZK4 316 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF430Q9H8G1 570 aaPredicted RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 RHOFQ9HBH0 211 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 GLTPQ9NZD2 209 aa1.87□□□□□ -2.11
CPNE3-204ENST00000517862 MRPS16Q9Y3D3 137 aaKnown RBP1.87□□□□□ -2.11
CPNE3-204ENST00000517862 IGLV4-69A0A075B6H9 119 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 TRAV8-3A0A0A6YYJ7 113 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 TINCRA0A1B0GVN0 87 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 DAPL1A0PJW8 107 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 KLLNB2CW77 178 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 CENPBD1B2RD01 187 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 BUB1B-PAK6H3BSN5 160 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 UPK2O00526 184 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 GYG2O15488 501 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 TRGV3P03979 118 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 LINC00869P0C866 280 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 SLC2A1P11166 492 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
CPNE3-204ENST00000517862 CBLN1P23435 193 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 PSMB9P28065 219 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 OPRK1P41145 380 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 AESQ08117 197 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 SMAGPQ0VAQ4 97 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 ESRGQ1W209 222 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 HLA-DRB5Q30154 266 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 COQ5Q5HYK3 327 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 C1orf140Q5VVS0 124 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 LAMTOR1Q6IAA8 161 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 SPINK6Q6UWN8 80 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 FA2HQ7L5A8 372 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 KRTAP11-1Q8IUC1 163 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 C4orf33Q8N1A6 199 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF664Q8N3J9 261 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 LINC00301Q8NCQ3 95 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 ORAOV1Q8WV07 137 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 GPR82Q96P67 336 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 TMEM208Q9BTX3 173 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 FAM206AQ9NX38 181 aa1.86□□□□□ -2.11
CPNE3-204ENST00000517862 NOP16Q9Y3C1 178 aaKnown RBP1.86□□□□□ -2.11
CPNE3-204ENST00000517862 POLR3HQ9Y535 204 aaPredicted RBP1.86□□□□□ -2.11
CPNE3-204ENST00000517862 PGPA6NDG6 321 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 F5H5K5 113 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ISLRO14498 428 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 AZIN1O14977 448 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 BIRC5O15392 142 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 COX7A2P2O60397 106 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 CST8O60676 142 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 CXorf1O96002 111 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 CA2P00918 260 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 C1QCP02747 245 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 MAS1P04201 325 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ATF1P18846 271 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 PYCR1P32322 319 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 RCVRNP35243 200 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 MNAT1P51948 309 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 MLLT11Q13015 90 aaPredicted RBP1.85□□□□□ -2.11
CPNE3-204ENST00000517862 SS18Q15532 418 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 TPRXLQ17RH7 258 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 FAM222AQ5U5X8 452 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 Q5W150 140 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ELP2Q6IA86 826 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 OR10K2Q6IF99 312 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 DNM1P34Q6PK57 102 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ORMDL3Q8N138 153 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 OR4B1Q8NGF8 309 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 PPCDCQ96CD2 204 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF714Q96N38 554 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 SERPINI1Q99574 410 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 PAIP2Q9BPZ3 127 aaKnown RBP1.85□□□□□ -2.11
CPNE3-204ENST00000517862 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 TVP23BQ9NYZ1 205 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 COMMD9Q9P000 198 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 PYCARDQ9ULZ3 195 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 ERGIC3Q9Y282 383 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 YTHDF2Q9Y5A9 579 aaKnown RBP1.85□□□□□ -2.11
CPNE3-204ENST00000517862 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1D-17A0A075B6S4 117 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 LOC102725191A0A1B0GVB3 256 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF850A8MQ14 1090 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 STK16O75716 305 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 WISP3O95389 354 aaPredicted RBP1.84□□□□□ -2.11
CPNE3-204ENST00000517862 AHSA1O95433 338 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 HLA-AP01891 365 aaKnown RBP1.84□□□□□ -2.11
CPNE3-204ENST00000517862 TYMSP04818 313 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 HIST1H1CP16403 213 aaKnown RBP1.84□□□□□ -2.11
CPNE3-204ENST00000517862 AKR1C4P17516 323 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 BLVRBP30043 206 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms