RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 AMY1AP04745 511 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 HIST1H1BP16401 226 aaKnown RBP12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 H7BYZ3 331 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 GP9P14770 177 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 Q56UQ5 140 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 ANAPC16Q96DE5 110 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 SLC25A39Q9BZJ4 359 aaPredicted RBP12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 KMT2BQ9UMN6 2715 aaPredicted RBP12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 C9JCJ5 164 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 DEFB113Q30KQ7 82 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 TMEM68Q96MH6 324 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
THUMPD3-210ENST00000515662 HELTA6NFD8 242 aa12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 PACRGQ96M98 296 aaPredicted RBP12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 USP9YO00507 2555 aaPredicted RBP12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 ABCA1O95477 2261 aa12.09□□□□□ -0.47
THUMPD3-210ENST00000515662 A0A1W2PPQ1 181 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 G3V318 75 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 IGHV3-23P01764 117 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 CD99P14209 185 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 GALR1P47211 349 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 RNF125Q96EQ8 232 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.47
THUMPD3-210ENST00000515662 IL4P05112 153 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 NBEAP1P0C6P0 100 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 MYCNOSP40205 109 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 VN1R17PQ8TDU5 208 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 SHANK2-AS3Q9BTD1 123 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 CELSR1Q9NYQ6 3014 aa12.08□□□□□ -0.48
THUMPD3-210ENST00000515662 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 A6NDX4 124 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 H3BUX3 64 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 HNF1AP20823 631 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 FCGR2BP31994 310 aaPredicted RBP12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 TXN2Q99757 166 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 TMEM14CQ9P0S9 112 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 POLQO75417 2590 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 OR2T8A6NH00 312 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
THUMPD3-210ENST00000515662 H3BRN7 92 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 J3QLI3 93 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 K7EN84 100 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 CTSGP08311 255 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 GNG4P50150 75 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 RHOGP84095 191 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 LY6EQ16553 131 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 TGFAP01135 160 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 Q5PR19 223 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 ZNF502Q8TBZ5 544 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 SRD5A3Q9H8P0 318 aa12.06□□□□□ -0.48
THUMPD3-210ENST00000515662 MDFIC2A0A1B0GVS7 189 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 LURAP1LQ8IV03 231 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 PEX7O00628 323 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 SCGB2A1O75556 95 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 BCL6BQ8N143 479 aaPredicted RBP12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 IGF2BP2-AS1Q96M15 143 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
THUMPD3-210ENST00000515662 PTPN13Q12923 2485 aa12.04□□□□□ -0.48
THUMPD3-210ENST00000515662 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
THUMPD3-210ENST00000515662 H3BTX0 84 aa12.04□□□□□ -0.48
THUMPD3-210ENST00000515662 AMBPP02760 352 aa12.04□□□□□ -0.48
THUMPD3-210ENST00000515662 HIST1H1EP10412 219 aaKnown RBP12.04□□□□□ -0.48
THUMPD3-210ENST00000515662 ADMP35318 185 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms