RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 KDELR1P24390 212 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 HOXA6P31267 233 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 DEFA3P59666 94 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 KRR1Q13601 381 aaKnown RBP0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 OR10AC1Q8NH08 325 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 ZNF431Q8TF32 576 aaPredicted RBP0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 UQCC1Q9NVA1 299 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 LY96Q9Y6Y9 160 aa0.14□□□□□ -2.39
SMARCA5-203ENST00000515531 PIK3C2GO75747 1445 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 SMIM9A6NGZ8 99 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 A8MWV9 139 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 KPNA3O00505 521 aaPredicted RBP0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 SRIP30626 198 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 EDDM3AQ14507 147 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 Q6ZS92 163 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 PDZD9Q8IXQ8 264 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 RNASE7Q9H1E1 156 aaKnown RBP0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 GLTPQ9NZD2 209 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 CECR2Q9BXF3 1484 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 SCN10AQ9Y5Y9 1956 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 MED12Q93074 2177 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 CITO14578 2027 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 ARHGEF11O15085 1522 aa0.13□□□□□ -2.39
SMARCA5-203ENST00000515531 NDUFB3O43676 98 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 ERC2-IT1O76042 136 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 OR51A2Q8NGJ7 313 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 OR10K1Q8NGX5 313 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 YPEL2Q96QA6 119 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 SLC25A21Q9BQT8 299 aaPredicted RBP0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 PRELID3BQ9Y3B1 194 aa0.12□□□□□ -2.39
SMARCA5-203ENST00000515531 RPP14O95059 124 aaKnown RBP0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 CEBPGP53567 150 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 DSCR4P56555 118 aaPredicted RBP0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 HIST1H3AP68431 136 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 H3F3AP84243 136 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 C22orf39Q6P5X5 142 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 LYSMD1Q96S90 227 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 NCOA1Q15788 1441 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 ZNF462Q96JM2 2506 aa0.11□□□□□ -2.39
SMARCA5-203ENST00000515531 RPS17P08708 135 aaKnown RBP0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 COX7CP15954 63 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 ZNF137PP52743 207 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 ROMO1P60602 79 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 MYL5Q02045 173 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 TMEM126AQ9H061 195 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 WFDC10AQ9H1F0 79 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 UCK1Q9HA47 277 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 SIP14410 1827 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 MYH10P35580 1976 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 OBSL1O75147 1896 aa0.1□□□□□ -2.39
SMARCA5-203ENST00000515531 E7EUB6 86 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 LYPLA2O95372 231 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 SPINT3P49223 89 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 FOXA3P55318 350 aaPredicted RBP0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 PIGPP57054 158 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 C6orf52Q5T4I8 152 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 BCL2L15Q5TBC7 163 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 PTRHD1Q6GMV3 140 aaKnown RBP0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 STAG3L4Q8TBR4 150 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 PBOV1Q9GZY1 135 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 PLXNA4Q9HCM2 1894 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 MYH7BA7E2Y1 1941 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 NAV3Q8IVL0 2385 aa0.09□□□□□ -2.4
SMARCA5-203ENST00000515531 FAT4Q6V0I7 4981 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 FMN1Q68DA7 1419 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 CXCL8P10145 99 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 ERP29P30040 261 aaKnown RBP0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 AESQ08117 197 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 SPATA45Q537H7 98 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 TMEM97Q5BJF2 176 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 ATOH7Q8N100 152 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 PARD6GQ9BYG4 376 aaPredicted RBP0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 JPT1Q9UK76 154 aa0.08□□□□□ -2.4
SMARCA5-203ENST00000515531 NUPR2A6NF83 97 aa0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 PPYP01298 95 aa0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 FXYD6P3P58550 94 aa0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 RANP62826 216 aaKnown RBP0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 CDK6Q00534 326 aa0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 RRN3P1Q2M238 152 aa0.07□□□□□ -2.4
SMARCA5-203ENST00000515531 CACNA1EQ15878 2313 aa0.06□□□□□ -2.4
SMARCA5-203ENST00000515531 C17orf112F2Z3M2 114 aa0.06□□□□□ -2.4
SMARCA5-203ENST00000515531 JMJD7-PLA2G4BH0Y9G9 81 aa0.06□□□□□ -2.4
SMARCA5-203ENST00000515531 Q8TAT8 98 aa0.06□□□□□ -2.4
SMARCA5-203ENST00000515531 MUCL1Q96DR8 90 aa0.06□□□□□ -2.4
SMARCA5-203ENST00000515531 TRAV23DV6A0A075B6W5 121 aa0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 TRBV30A0A0K0K1B3 111 aa0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 GNPDA2Q8TDQ7 276 aa0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 ZC2HC1AQ96GY0 325 aa0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 FAM103A1Q9BTL3 118 aaKnown RBP0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 KIF1BO60333 1816 aa0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 ASH1LQ9NR48 2969 aaKnown RBP0.05□□□□□ -2.4
SMARCA5-203ENST00000515531 TRAV4A0A0B4J268 109 aa0.04□□□□□ -2.4
SMARCA5-203ENST00000515531 M0R233 179 aa0.04□□□□□ -2.4
SMARCA5-203ENST00000515531 UBE2BP63146 152 aa0.04□□□□□ -2.4
SMARCA5-203ENST00000515531 GLIPR1L1Q6UWM5 242 aa0.04□□□□□ -2.4
SMARCA5-203ENST00000515531 RAB37Q96AX2 223 aa0.04□□□□□ -2.4
SMARCA5-203ENST00000515531 GGACTQ9BVM4 153 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms