RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ZDBF2Q9HCK1 2354 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 CEP192Q8TEP8 1941 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRAV3A0A0B4J244 114 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 A8MWV9 139 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 AIPO00170 330 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 HMGB3O15347 200 aaKnown RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 GGCTO75223 188 aaKnown RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 DEFA3P59666 94 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 CNBPP62633 177 aaKnown RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 DYNLT1P63172 113 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 TAF1AQ15573 450 aaPredicted RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 DEFB113Q30KQ7 82 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 BCL2L15Q5TBC7 163 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 Q8N6K4 173 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 LINC00301Q8NCQ3 95 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 SLC30A7Q8NEW0 376 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 STAG3L4Q8TBR4 150 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 CANT1Q8WVQ1 401 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 CEP19Q96LK0 163 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 TEX37Q96LM6 180 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 C6orf62Q9GZU0 229 aaPredicted RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 ACER3Q9NUN7 267 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 RASL12Q9NYN1 266 aa0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 ARHGEF28Q8N1W1 1705 aaKnown RBP0.47□□□□□ -2.33
TRAPPC11-210ENST00000513600 EIF3AQ14152 1382 aaKnown RBP0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 RIMBP3CA6NJZ7 1639 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 RIMBP3BA6NNM3 1639 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 RIMBP3Q9UFD9 1639 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 ADGRB2O60241 1585 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 TNRC6BQ9UPQ9 1833 aaKnown RBP0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 CNTRLQ7Z7A1 2325 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRBV6-8A0A0A6YYG3 113 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 M0R378 163 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 TAX1BP3O14907 124 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 INE1O15225 51 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 NDUFB3O43676 98 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 ATG12O94817 140 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 GADD45GO95257 159 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 NDUFC2O95298 119 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 DHFRP00374 187 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 NCALDP61601 193 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 UBE2BP63146 152 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 BASP1P80723 227 aaKnown RBP0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 SCGB2B2Q4G0G5 96 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 HACD4Q5VWC8 232 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 S100A7AQ86SG5 101 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 PDZD9Q8IXQ8 264 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 Q8IYB0 196 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 GPER1Q99527 375 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 STOML2Q9UJZ1 356 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 PRNDQ9UKY0 176 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 SPTBP11277 2137 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
TRAPPC11-210ENST00000513600 TAF1LQ8IZX4 1826 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 DUXBA0A1W2PPF3 345 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZNF736B4DX44 427 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 G3V2T6 193 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 H7C1C5 153 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMEM256-PLSCR3K7ERE1 68 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TIMM17BO60830 172 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 IFNA1P01562 189 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 HLA-EP13747 358 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 LCN6P62502 163 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 RPL19P84098 196 aaKnown RBP0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 MYL5Q02045 173 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 MPV17LQ2QL34 196 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 AKR1C8PQ5T2L2 129 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TEX261Q6UWH6 196 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 SOSTDC1Q6X4U4 206 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMED4Q7Z7H5 227 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 OR10K1Q8NGX5 313 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMEM254Q8TBM7 123 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 SLC25A21Q9BQT8 299 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMEM70Q9BUB7 260 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 PBOV1Q9GZY1 135 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 SH3BGRL3Q9H299 93 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 LYRM2Q9NU23 88 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 CHCHD2Q9Y6H1 151 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 U3KQ87 197 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 MIA2Q96PC5 1412 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 CAMSAP1Q5T5Y3 1602 aa0.45□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZGRF1Q86YA3 2104 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 TCRBV4S1A1TA0A5B7 111 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 CCDC160A6NGH7 325 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 E7EUB6 86 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 CCL16O15467 120 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 CST8O60676 142 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 NFYBP25208 207 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 PHBP35232 272 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 DYNLT3P51808 116 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 DSCR4P56555 118 aaPredicted RBP0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 ROMO1P60602 79 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 GNG5P63218 68 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 POU6F1Q14863 301 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 GDF5OSQ5U4N7 250 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 EIF5AL1Q6IS14 154 aaKnown RBP0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 C2orf82Q6UX34 121 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 LYG2Q86SG7 212 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 CLECL1Q8IZS7 167 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 EXOC3-AS1Q8N2X6 119 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms