RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TMEM268Q5VZI3 342 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 CCDC190Q86UF4 302 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 SLC24A4Q8NFF2 622 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 OR51G1Q8NGK1 321 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
TCOF1-212ENST00000513538 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 CACNG5Q9UF02 275 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 SCP2D1Q9UJQ7 156 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 YTHDF2Q9Y5A9 579 aaKnown RBP6.8□□□□□ -1.32
TCOF1-212ENST00000513538 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 ZNF701M0R085 212 aaPredicted RBP6.79□□□□□ -1.32
TCOF1-212ENST00000513538 NOL3O60936 208 aaKnown RBP6.79□□□□□ -1.32
TCOF1-212ENST00000513538 PRM2P04554 102 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 FOXI2Q6ZQN5 318 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 RNASE11Q8TAA1 199 aaKnown RBP6.79□□□□□ -1.32
TCOF1-212ENST00000513538 ACY3Q96HD9 319 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 LINC00052Q96N35 136 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 SCGB3A2Q96PL1 93 aa6.79□□□□□ -1.32
TCOF1-212ENST00000513538 HEYLQ9NQ87 328 aaPredicted RBP6.79□□□□□ -1.32
TCOF1-212ENST00000513538 IGKV1D-37A0A075B6S9 117 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 A0A0B4J2A0 478 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 LCE2BO14633 110 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 PITX3O75364 302 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 RD3LP0DJH9 198 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 PSMB3P49720 205 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 OR4B1Q8NGF8 309 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 DEDD2Q8WXF8 326 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 C20orf173Q96LM9 149 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 C17orf77Q96MU5 243 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 SHPKQ9UHJ6 478 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 KCNIP3Q9Y2W7 256 aa6.78□□□□□ -1.32
TCOF1-212ENST00000513538 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 CEBPZOSA8MTT3 80 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 HBE1P02100 147 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 SULT1A3P0DMM9 295 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 SULT1A4P0DMN0 295 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 AKR1C4P17516 323 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 CCR6P51684 374 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 PAX9P55771 341 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 PSG9Q00887 426 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 ZNF90Q03938 601 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 TMEM128Q5BJH2 165 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 FAM78BQ5VT40 261 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 ZNRF2Q8NHG8 242 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 PBDC1Q9BVG4 233 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 SRRQ9GZT4 340 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 MCUBQ9NWR8 336 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 CACFD1Q9UGQ2 172 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 GOLT1BQ9Y3E0 138 aa6.77□□□□□ -1.33
TCOF1-212ENST00000513538 A0A0J9YX75 114 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 DUXBA0A1W2PPF3 345 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 A8MTW9 85 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 FAM3BP58499 235 aaPredicted RBP6.76□□□□□ -1.33
TCOF1-212ENST00000513538 DAD1P61803 113 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 SMCO1Q147U7 214 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 RRN3P1Q2M238 152 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 OR8G2PQ6IF36 304 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 ETFRF1Q6IPR1 90 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 LGI3Q8N145 548 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 Q8N1X5 172 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 SDHCQ99643 169 aaPredicted RBP6.76□□□□□ -1.33
TCOF1-212ENST00000513538 SLC25A21Q9BQT8 299 aaPredicted RBP6.76□□□□□ -1.33
TCOF1-212ENST00000513538 RBKSQ9H477 322 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 TMED3Q9Y3Q3 217 aa6.76□□□□□ -1.33
TCOF1-212ENST00000513538 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
TCOF1-212ENST00000513538 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 ISLRO14498 428 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
TCOF1-212ENST00000513538 SLC25A6P12236 298 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 ANXA3P12429 323 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 S100A5P33763 92 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 FAUP35544 74 aaKnown RBP6.75□□□□□ -1.33
TCOF1-212ENST00000513538 ID1P41134 155 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 AP3S2P59780 193 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 LYZP61626 148 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 SRPXP78539 464 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 BAK1Q16611 211 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 C15orf53Q8NAA6 179 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 COQ8AQ8NI60 647 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 DTD1Q8TEA8 209 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 C7orf50Q9BRJ6 194 aaKnown RBP6.75□□□□□ -1.33
TCOF1-212ENST00000513538 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 U3KQ87 197 aa6.75□□□□□ -1.33
TCOF1-212ENST00000513538 IGKV1OR2-108A0A075B7D4 117 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 PIGBOS1A0A0B4J2F0 54 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 CCDC160A6NGH7 325 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
TCOF1-212ENST00000513538 SFT2D2O95562 160 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms