RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C12orf4Q9NQ89 552 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 IFT46Q9NQC8 304 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 NECAP2Q9NVZ3 263 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 NDUFB11Q9NX14 153 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 COA4Q9NYJ1 87 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 PRELID3BQ9Y3B1 194 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 WASHC3Q9Y3C0 194 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 CSDC2Q9Y534 153 aaKnown RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 ZANQ9Y493 2812 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 A0A096LNJ9 63 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 IGKV1D-13A0A0B4J2D9 117 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 TMEM235A6NFC5 223 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 LYRM9A8MSI8 78 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 SEC14L6B5MCN3 397 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 SNAI2O43623 268 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 SC5DO75845 299 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 RBBP9O75884 186 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 CRYZL1O95825 349 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 NAPSAO96009 420 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 CA2P00918 260 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 PMP2P02689 132 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 TRGV3P03979 118 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 CTXN2P0C2S0 81 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 ZNF735P0CB33 412 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 IGKV1-13P0DP09 117 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 PTHLHP12272 177 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 HIST1H1DP16402 221 aaKnown RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 HRH1P35367 487 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 LGALS7P47929 136 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 RAB9AP51151 201 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 FXYD4P59646 89 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 TSPAN5P62079 268 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 PITPNAQ00169 270 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 EBI3Q14213 229 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 C5orf64Q2M2E5 130 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 VMA21Q3ZAQ7 101 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 ACTBL2Q562R1 376 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 UBE2UQ5VVX9 321 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 ZNF660Q6AZW8 331 aaPredicted RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 ZNF833PQ6ZTB9 187 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 LINC00173Q6ZV60 143 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 SSX9Q7RTT3 188 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 LYPD6Q86Y78 171 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 OR5H6Q8NGV6 325 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 LGALS14Q8TCE9 139 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 SRSF12Q8WXF0 261 aaKnown RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 OR4C12Q96R67 309 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 HINT2Q9BX68 163 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 ALX4Q9H161 411 aaPredicted RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 HRASLSQ9HDD0 168 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 COMMD3Q9UBI1 195 aa2.7□□□□□ -1.98
HTT-210ENST00000512909 ZMAT5Q9UDW3 170 aaKnown RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
HTT-210ENST00000512909 IGHV3-66A0A0C4DH42 116 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 IGKV1-6A0A0C4DH72 117 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 OR5H14A6NHG9 310 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 LINC01619G3V211 115 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 H0YJW9 148 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 OVOL1O14753 267 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 TNFAIP8O95379 198 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 IGKV1-16P04430 117 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 DEFA4P12838 97 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 GALP22466 123 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 PRSS3P35030 304 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 TGFBR1P36897 503 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 VBP1P61758 197 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ATP5G2Q06055 141 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ZNF616Q08AN1 781 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 LY6G6FQ5SQ64 297 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 GPR107Q5VW38 600 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 HACD4Q5VWC8 232 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 SFXN4Q6P4A7 337 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ZNF880Q6PDB4 577 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ZFP2Q6ZN57 461 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 TEX43Q6ZNM6 134 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 IDO2Q6ZQW0 420 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 PDPNQ86YL7 162 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 SNX29P2Q8IUI4 249 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 GAPTQ8N292 157 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 Q8N6K4 173 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 CYB561D1Q8N8Q1 229 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 WFDC9Q8NEX5 89 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ADTRPQ96IZ2 230 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 RNF5Q99942 180 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 SDHAF2Q9NX18 166 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 RHBDL2Q9NX52 303 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 TAS2R8Q9NYW2 309 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 ANXA10Q9UJ72 324 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 NUBP2Q9Y5Y2 271 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.69□□□□□ -1.983e-11■■■□□ 16.9
HTT-210ENST00000512909 DOCK11Q5JSL3 2073 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
HTT-210ENST00000512909 COL6A5A8TX70 2615 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 TRBV6-7A0A0A0MS04 114 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 IGHV3-74A0A0B4J1X5 117 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 PLAC8L1A1L4L8 177 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 CCDC160A6NGH7 325 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 SULT1C2O00338 296 aa2.68□□□□□ -1.98
HTT-210ENST00000512909 MFNGO00587 321 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms