RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 TIMM23O14925 209 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 IGKV1-17P01599 117 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 CD33P20138 364 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 AMTP48728 403 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 PLGLAQ15195 96 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 MMDQ15546 238 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 LDLRAD2Q5SZI1 272 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 C19orf35Q6ZS72 473 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 C1orf122Q6ZSJ8 110 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 NEU4Q8WWR8 484 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 CFHR4Q92496 578 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 RCHY1Q96PM5 261 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 RPP21Q9H633 154 aaKnown RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 CBLN4Q9NTU7 201 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 ODF3BA8MYP8 253 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 NPIPB6E9PJ23 425 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 K7EIM0 57 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 NBR2O15453 112 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 CNIH1O95406 144 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 APELAP0DMC3 54 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 PRTN3P24158 256 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 CDKN1AP38936 164 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 KLRB1Q12918 225 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 GDF5OSQ5U4N7 250 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 PRR27Q6MZM9 219 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 LYPD1Q8N2G4 141 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 Q8N976 141 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 MIEN1Q9BRT3 115 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 SHANK2-AS3Q9BTD1 123 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 ONECUT1Q9UBC0 465 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 FBXL7Q9UJT9 491 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 ANKHD1Q8IWZ3 2542 aaKnown RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 IGHV3-21A0A0B4J1V1 117 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 VWC2LB2RUY7 222 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 M0R143 59 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 RAB4AP20338 218 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 LYZP61626 148 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 C11orf71Q6IPW1 123 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 OR4B1Q8NGF8 309 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF48Q96MX3 618 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 ALKBH7Q9BT30 221 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 VAMP8Q9BV40 100 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-210ENST00000512332 DMXL2Q8TDJ6 3036 aa7.32□□□□□ -1.24
CPNE4-210ENST00000512332 SPTBN2O15020 2390 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 TRAV30A0A087WSZ9 112 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 OOSP1A8MZH6 123 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 M0QZK8 103 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 P01737 135 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 ADORA2A-AS1P86434 159 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 PRB3Q04118 309 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 FAM162BQ5T6X4 162 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 LINC00322Q6ZN03 302 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 S100A7AQ86SG5 101 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 NIT1Q86X76 327 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 BPIFA4PQ86YQ2 179 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 TRBV19A0A075B6N1 114 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 LOC105371242A0A075B767 164 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 DIRC3C9JPN6 131 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 IGLV2-11P01706 119 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 GPR6P46095 362 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 ARF6P62330 175 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 HBBP68871 147 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 TDRG1Q3Y452 100 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 C16orf54Q6UWD8 224 aa7.31□□□□□ -1.24
CPNE4-210ENST00000512332 DAZAP1Q96EP5 407 aaKnown RBP7.31□□□□□ -1.24
CPNE4-210ENST00000512332 WI2-2373I1.2A0A1W2PRP0 233 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 NPIPB5A8MRT5 1133 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 H3BRN7 92 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 IGLC2P0DOY2 106 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 KRTDAPP60985 99 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 NUTF2P61970 127 aaKnown RBP7.3□□□□□ -1.24
CPNE4-210ENST00000512332 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 CCDC144NLQ6NUI1 221 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF562Q6V9R5 426 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 RBPMS2Q6ZRY4 209 aaKnown RBP7.3□□□□□ -1.24
CPNE4-210ENST00000512332 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 Q86TA4 180 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 KIR3DL3Q8N743 410 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF491Q8N8L2 437 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 GTSF1Q8WW33 167 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
CPNE4-210ENST00000512332 ZFP30Q9Y2G7 519 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 RNF114Q9Y508 228 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 ABCA1O95477 2261 aa7.3□□□□□ -1.24
CPNE4-210ENST00000512332 EREGO14944 169 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 PMCHP20382 165 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 C5orf64Q2M2E5 130 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 ASPHD1Q5U4P2 390 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 TMEM75Q8N9X5 138 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms