RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 OR4F5Q8NH21 305 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 OR4F4Q96R69 305 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 LINC00527Q9UJ94 153 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCLT1-209ENST00000511426 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.8□□□□□ -0.52
SCLT1-209ENST00000511426 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 FAM90A2PQ658T7 463 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 CLEC19AQ6UXS0 136 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 IL17RELQ6ZVW7 336 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 BPIFA4PQ86YQ2 179 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 RNF152Q8N8N0 203 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
SCLT1-209ENST00000511426 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 S4R3C0 116 aa11.8□□□□□ -0.52
SCLT1-209ENST00000511426 GP9P14770 177 aa11.79□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF418Q8TF45 676 aaPredicted RBP11.79□□□□□ -0.52
SCLT1-209ENST00000511426 FXYD5Q96DB9 178 aa11.79□□□□□ -0.52
SCLT1-209ENST00000511426 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
SCLT1-209ENST00000511426 CSPG4Q6UVK1 2322 aa11.79□□□□□ -0.52
SCLT1-209ENST00000511426 ITPR3Q14573 2671 aa11.79□□□□□ -0.52
SCLT1-209ENST00000511426 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 IGHV3-23P01764 117 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 SRD5A1P18405 259 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 RHEBQ15382 184 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
SCLT1-209ENST00000511426 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 GPR82Q96P67 336 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 TRAV5A0A0B4J249 113 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
SCLT1-209ENST00000511426 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
SCLT1-209ENST00000511426 UBE2G2P60604 165 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 CLRN3Q8NCR9 226 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 OR4F17Q8NGA8 305 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
SCLT1-209ENST00000511426 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 B4DEV8 164 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 NDUFA4O00483 81 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
SCLT1-209ENST00000511426 OR10J4P0C629 311 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 NBEAP1P0C6P0 100 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 ARL3P36405 182 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 ATP5G3P48201 142 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 PDE6HQ13956 83 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 C1orf194Q5T5A4 169 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 LYPD1Q8N2G4 141 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
SCLT1-209ENST00000511426 H3BQ15 152 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 PARLQ9H300 379 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 PRELID1Q9Y255 219 aa11.76□□□□□ -0.53
SCLT1-209ENST00000511426 FASNP49327 2511 aaKnown RBP11.76□□□□□ -0.53
SCLT1-209ENST00000511426 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
SCLT1-209ENST00000511426 LY6G6DO95868 133 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 PYYP10082 97 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 CEBPGP53567 150 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 HILS1P60008 231 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 WFDC12Q8WWY7 111 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 UBE2E2Q96LR5 201 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 METTL26Q96S19 204 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 CCDC168Q8NDH2 2452 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 ZNF253O75346 499 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 CD99P14209 185 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 MEOX2P50222 304 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 TMEM95Q3KNT9 176 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 HIST1H2BAQ96A08 127 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
SCLT1-209ENST00000511426 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
SCLT1-209ENST00000511426 GGTLC3B5MD39 225 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 CRYBA1P05813 215 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 IGLC2P0DOY2 106 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 CRYBB3P26998 211 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 MYCNOSP40205 109 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
SCLT1-209ENST00000511426 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 A0A087WWC5 75 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 C9JCJ5 164 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 M0R036 132 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
SCLT1-209ENST00000511426 NPPCP23582 126 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
SCLT1-209ENST00000511426 AWAT1Q58HT5 328 aa11.73□□□□□ -0.53
SCLT1-209ENST00000511426 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms