RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 SPTBN4Q9H254 2564 aa7.6□□□□□ -1.19
POLR2J3-215ENST00000511313 LAMA3Q16787 3333 aa7.6□□□□□ -1.19
POLR2J3-215ENST00000511313 SPRY2O43597 315 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 CGB3P0DN86 165 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 CGB7P0DN87 165 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 FCER1GP30273 86 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 SRSF4Q08170 494 aaKnown RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 PNRC1Q12796 327 aaPredicted RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 FABP5P3A8MUU1 101 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 TFF1P04155 84 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 S100A1P23297 94 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 RANP62826 216 aaKnown RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 ZNF90Q03938 601 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 AKAP6Q13023 2319 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 FAM53AQ6NSI3 398 aaPredicted RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 OR5AC2Q9NZP5 309 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 WDR83OSQ9Y284 106 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 PTPN13Q12923 2485 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 PSCAO43653 123 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 AMY1AP04745 511 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 TAS2R60P59551 318 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 SIGLEC8Q9NYZ4 499 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 V9GYH0 126 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 ZNF98A6NK75 572 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 ZNF207O43670 478 aaKnown RBP7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 CBLN1P23435 193 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 ACTL10Q5JWF8 245 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 C22orf34Q6ZV56 151 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 Q8N2B8 174 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 PIFOQ8TCI5 191 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 SHANK2-AS3Q9BTD1 123 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
POLR2J3-215ENST00000511313 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 ZNF138P52744 262 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 NHLRC2Q8NBF2 726 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 C16orf74Q96GX8 76 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 FAM210BQ96KR6 192 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 SMIM7Q9BQ49 75 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 FLVCR2Q9UPI3 526 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A1W2PRE2 83 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 LY6LH3BQJ8 138 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 LYL1P12980 280 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 AARDQ4LEZ3 155 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 CBY1Q9Y3M2 126 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 S100A6P06703 90 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 ZNF688P0C7X2 276 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 CLRN3Q8NCR9 226 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 TLN1Q9Y490 2541 aaKnown RBP7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 SNAPINO95295 136 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 MIFP14174 115 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 BAK1Q16611 211 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 DUX4L9Q6RFH8 374 aaPredicted RBP7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 AQP10Q96PS8 301 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 PYGO2Q9BRQ0 406 aa7.58□□□□□ -1.2
POLR2J3-215ENST00000511313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.58□□□□□ -1.27e-8■■■□□ 16.4
POLR2J3-215ENST00000511313 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 PSG1P11464 419 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 C1orf147Q96MC9 270 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 SOX21Q9Y651 276 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 ROS1P08922 2347 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 C7orf66A4D0T2 115 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 LINC01548A6NM66 108 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 RPL36AP83881 106 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 MIC13Q5XKP0 118 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 EIF4E3Q8N5X7 224 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 RPL36ALQ969Q0 106 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 SPG11Q96JI7 2443 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 ZNF705GA8MUZ8 300 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 ATP5G1P05496 136 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 RNF224P0DH78 156 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 ATP5G3P48201 142 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 PRB3Q04118 309 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 C2CD4CQ8TF44 421 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 FAM110AQ9BQ89 295 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 NAV3Q8IVL0 2385 aa7.57□□□□□ -1.2
POLR2J3-215ENST00000511313 LINC00473A8K010 186 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 SIX6O95475 246 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 MFAP2P55001 183 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 ICAM4Q14773 271 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 TMEM14CQ9P0S9 112 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 U3KQK5 164 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 ERVFC1-1P60608 527 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 SLC25A39Q9BZJ4 359 aaPredicted RBP7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 PKD1L2Q7Z442 2459 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 ALPK2Q86TB3 2170 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 MED12Q93074 2177 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 EVI2AP22794 236 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 AP1S3Q96PC3 154 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 RTBDNQ9BSG5 229 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms