RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 SPACA5Q96QH8 159 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 FBXL7Q9UJT9 491 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 PILRAQ9UKJ1 303 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 KCNE3Q9Y6H6 103 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 RALGAPA2Q2PPJ7 1873 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 SIP14410 1827 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 MYH1P12882 1939 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 MYH4Q9Y623 1939 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 SMIM27A0A1W2PRY6 76 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 ADARB2-AS1A8MUL3 147 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 RS1O15537 224 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 TCL1BO95988 128 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CGAP01215 116 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 PPP1R32Q7Z5V6 425 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 SPSB2Q99619 263 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 TRBV6-6A0A0A6YYG2 114 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.95□□□□□ -1.94
USP53-205ENST00000509769 NPIPB5A8MRT5 1133 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 PAX4O43316 350 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 AGFG2O95081 481 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CEACAM5P06731 702 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 RNASE2P10153 161 aaKnown RBP2.95□□□□□ -1.94
USP53-205ENST00000509769 LTBRP36941 435 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 GFI1BQ5VTD9 330 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 TMEM200BQ69YZ2 307 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 RNF183Q96D59 192 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 LOC102723996A0A087X1L8 192 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 A0A0J9YW62 118 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 TINCRA0A1B0GVN0 87 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 M0QXV9 152 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 ZG16O60844 167 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 ELANEP08246 267 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CECR9P0C854 216 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CCL3P10147 92 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CD59P13987 128 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 GP9P14770 177 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 IGLL1P15814 213 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 CCL3L1P16619 93 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 HAMPP81172 84 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 LY6DQ14210 128 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 MRPL14Q6P1L8 145 aaKnown RBP2.95□□□□□ -1.94
USP53-205ENST00000509769 SPSB3Q6PJ21 355 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 NRACQ8N912 160 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 FAM60AQ9NP50 221 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 RFNGQ9Y644 331 aa2.95□□□□□ -1.94
USP53-205ENST00000509769 IGLV3-25P01717 112 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 BAALC-AS2P0C853 105 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 RBX1P62877 108 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 INSL4Q14641 139 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 NMSQ5H8A3 153 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 C9orf139Q6ZV77 190 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 CCDC140Q96MF4 163 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 EMC6Q9BV81 110 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SIGLEC9Q9Y336 463 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 MSGN1A6NI15 193 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 C15orf61A6NNL5 157 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 E9PQ18 207 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 CRLF1O75462 422 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 ZNF83P51522 516 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SLC25A47Q6Q0C1 308 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 TMEM14EPQ6UXP3 125 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 Q6ZWC4 215 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SPATA12Q7Z6I5 190 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 LHFPL1Q86WI0 220 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 TMEM256Q8N2U0 113 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SPTSSBQ8NFR3 76 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 LINC00526Q96FQ7 95 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SCRT2Q9NQ03 307 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 A0A0J9YXY3 114 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 K7ENP7 123 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 NTN3O00634 580 aaPredicted RBP2.94□□□□□ -1.94
USP53-205ENST00000509769 CXCL13O43927 109 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 NXPH4O95158 308 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 IGLV3-27P01718 113 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 PRCDQ00LT1 54 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 HGFACQ04756 655 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 FAM104BQ5XKR9 115 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 ZNF493Q6ZR52 646 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 KLK15Q9H2R5 256 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 MYH15Q9Y2K3 1946 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 CDK5RAP2Q96SN8 1893 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 TRAV17A0A0B4J275 112 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 TMEM256-PLSCR3K7ERE1 68 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 P0DMU3 169 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 FAM231AP0DMU4 169 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 FAM231CP0DMU5 169 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 EGR1P18146 543 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 RPL36AP83881 106 aaKnown RBP2.94□□□□□ -1.94
USP53-205ENST00000509769 PSG4Q00888 419 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 SS18Q15532 418 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 RPL36ALQ969Q0 106 aaKnown RBP2.94□□□□□ -1.94
USP53-205ENST00000509769 C1QTNF5Q9BXJ0 243 aa2.94□□□□□ -1.94
USP53-205ENST00000509769 IGHV3OR15-7A0A075B7D8 119 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 OOSP1A8MZH6 123 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 WNT2P09544 360 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 C1orf61Q13536 156 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 EFNB3Q15768 340 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 CASC2Q6XLA1 102 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms