RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 LCE6AA0A183 80 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 IZUMO1RA6ND01 250 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 CLN5O75503 358 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 MBP02144 154 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 RAB14P61106 215 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 SELENOTP62341 195 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 RAB31Q13636 194 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 HAGHQ16775 308 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 LCN12Q6JVE5 192 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 STPG3Q8N7X2 389 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 NECAP1Q8NC96 275 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ACY3Q96HD9 319 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 SPATA25Q9BR10 227 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 TRAV1-1A0A0B4J248 108 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 MFSD2BA6NFX1 497 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 NDUFB8O95169 186 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 M6PRP20645 277 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 OR10J1P30954 320 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 FHITP49789 147 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 BLOC1S1P78537 153 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 RHOGP84095 191 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 AKR1C8PQ5T2L2 129 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 PXDC1Q5TGL8 231 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 Q6ZRG5 221 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF709Q8N972 641 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 PCNPQ8WW12 178 aaKnown RBP11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF414Q96IQ9 312 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 CXorf58Q96LI9 332 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 TXN2Q99757 166 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF705EA8MWA4 302 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-208ENST00000509389 BMPR1BO00238 502 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 OR2J3O76001 311 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 PLP1P60201 277 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 RAB2AP61019 212 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 B2MP61769 119 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 FFAR4Q5NUL3 377 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 MIC13Q5XKP0 118 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
HMGCL-208ENST00000509389 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 TUBA4BQ9H853 241 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.65
HMGCL-208ENST00000509389 MFAP4P55083 255 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 ATP5G2Q06055 141 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 C15orf32Q32M92 178 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 SPSB3Q6PJ21 355 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 ADAMTSL5Q6ZMM2 481 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 PEMTQ9UBM1 199 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 DNAH1Q9P2D7 4330 aa11.01□□□□□ -0.65
HMGCL-208ENST00000509389 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11□□□□□ -0.65
HMGCL-208ENST00000509389 NPBWR1P48145 328 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 ELLP55199 621 aaPredicted RBP11□□□□□ -0.65
HMGCL-208ENST00000509389 YPEL3P61236 119 aaPredicted RBP11□□□□□ -0.65
HMGCL-208ENST00000509389 ACOT6Q3I5F7 207 aaPredicted RBP11□□□□□ -0.65
HMGCL-208ENST00000509389 EIF4E3Q8N5X7 224 aaKnown RBP11□□□□□ -0.65
HMGCL-208ENST00000509389 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 FAM213BQ8TBF2 198 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 LYSTQ99698 3801 aa11□□□□□ -0.65
HMGCL-208ENST00000509389 IGHV3-21A0A0B4J1V1 117 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 CTXND1A0A1B0GTU2 59 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 ZFP92A6NM28 416 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 OR5G3P0C626 314 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 ZNF90Q03938 601 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-208ENST00000509389 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
HMGCL-208ENST00000509389 LINC00322Q6ZN03 302 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-208ENST00000509389 TRBV7-1A0A0A6YYK4 115 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 ZNF785A8K8V0 405 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 OR2C1O95371 312 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 TOMM40O96008 361 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 CD81P60033 236 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 OR10G4Q8NGN3 311 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 OR10G9Q8NGN4 311 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 OR10G7Q8NGN6 311 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 SCRT1Q9BWW7 348 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 RETNQ9HD89 108 aa10.98□□□□□ -0.65
HMGCL-208ENST00000509389 PPP5D1E7EU14 171 aa10.97□□□□□ -0.65
HMGCL-208ENST00000509389 CTSGP08311 255 aa10.97□□□□□ -0.65
HMGCL-208ENST00000509389 GATA2P23769 480 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-208ENST00000509389 ADMP35318 185 aa10.97□□□□□ -0.65
HMGCL-208ENST00000509389 CDC34P49427 236 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-208ENST00000509389 GATAD1Q8WUU5 269 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms