RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 THAP8Q8NA92 274 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 C11orf45Q8TAV5 145 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 WDR12Q9GZL7 423 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 PSENENQ9NZ42 101 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 PFDN2Q9UHV9 154 aa10.78□□□□□ -0.68
UBE2D3-228ENST00000508974 CCNKO75909 580 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 ATF4P18848 351 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 ID3Q02535 119 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 GDF5OSQ5U4N7 250 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 OR8I2Q8N0Y5 310 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 OR4D5Q8NGN0 318 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 C7orf50Q9BRJ6 194 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 C20orf85Q9H1P6 137 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 GSKIPQ9P0R6 139 aa10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 KLK5Q9Y337 293 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-228ENST00000508974 TRAV6A0A075B6T7 132 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 IGHV4-28A0A0C4DH34 117 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 CCSO14618 274 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 PLA2G10O15496 165 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 LYRM1O43325 122 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 ORM2P19652 201 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 FXYD7P58549 80 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 Q8NAQ8 132 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 NDUFA13Q9P0J0 144 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 DOK5Q9P104 306 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 XCL2Q9UBD3 114 aa10.76□□□□□ -0.69
UBE2D3-228ENST00000508974 H3BMM0 161 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 RBMY1A1P0DJD3 496 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 RBMY1FQ15415 496 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 TMEM41BQ5BJD5 291 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 BPIFCQ8NFQ6 507 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 OR1B1Q8NGR6 318 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 SLC25A32Q9H2D1 315 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 X6R8D5 127 aa10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-228ENST00000508974 METTL15P1P0C7V9 234 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 ID1P41134 155 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 PAX9P55771 341 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 TBC1D24Q9ULP9 559 aa10.74□□□□□ -0.69
UBE2D3-228ENST00000508974 FAM25EA8MYX2 175 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 F6UB75 175 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 SOCS3O14543 225 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 TCRBP04435 133 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 HLA-DRB4P13762 266 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 MIFP14174 115 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 PSMB3P49720 205 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 NUTF2P61970 127 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 CSNK1G2-AS1Q8NCQ2 148 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 OR4B1Q8NGF8 309 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 MITD1Q8WV92 249 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 SMIM8Q96KF7 97 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 SEC22CQ9BRL7 303 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 TMEM147Q9BVK8 224 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 SCRT1Q9BWW7 348 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 SEPSECSQ9HD40 501 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 NUDT15Q9NV35 164 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 HLA-DRB4X5D2U9 266 aa10.73□□□□□ -0.69
UBE2D3-228ENST00000508974 IGHV3OR16-12A0A075B7B8 117 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 ZNF98A6NK75 572 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 PMS2P5A8MQ11 134 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 ZNF705EA8MWA4 302 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 IL5P05113 134 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 GALR1P47211 349 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 CYP2G1PQ6ZSU1 146 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 TMEM144Q7Z5S9 345 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 C16orf92Q96LL3 132 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 RSG1Q9BU20 258 aa10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 SAV1Q9H4B6 383 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 RCL1Q9Y2P8 373 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-228ENST00000508974 ELOA3CA0A087WX78 387 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 OR5G3P0C626 314 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 LINC00869P0C866 280 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 FGL1Q08830 312 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 IGFL4Q6B9Z1 124 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 TMEM14EPQ6UXP3 125 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 ZNF767PQ75MW2 155 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 C1QTNF4Q9BXJ3 329 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 MGAT4CQ9UBM8 478 aa10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 LSM5Q9Y4Y9 91 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-228ENST00000508974 ISLRO14498 428 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 HLA-DMBP28068 263 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 DLK1P80370 383 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 SLC38A11Q08AI6 406 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 ZNF846Q147U1 533 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 CNPY1Q3B7I2 92 aa10.7□□□□□ -0.7
UBE2D3-228ENST00000508974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms