RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 OR1S2Q8NGQ3 325 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 MCRIP2Q9BUT9 160 aaKnown RBP4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 GPR61Q9BZJ8 451 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 GNB4Q9HAV0 340 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 NPVFQ9HCQ7 196 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZMAT5Q9UDW3 170 aaKnown RBP4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 MFSD2BA6NFX1 497 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 PMS2P5A8MQ11 134 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 H3BP45 60 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 NDUFA4O00483 81 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 MPDU1O75352 247 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 DFFBO76075 338 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 NDUFB4O95168 129 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR2C1O95371 312 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 CTSGP08311 255 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 INSL3P51460 131 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 YPEL3P61236 119 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 SELENOTP62341 195 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 KLF5Q13887 457 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 GAMTQ14353 236 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 TWIST1Q15672 202 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 LRRC37A5PQ49AS3 106 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 Q56UQ5 140 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 CLEC19AQ6UXS0 136 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 S100A7AQ86SG5 101 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 THAP8Q8NA92 274 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR2T35Q8NGX2 323 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 FAM210AQ96ND0 272 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR4C12Q96R67 309 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 TRGV9Q99603 122 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 RNF126Q9BV68 326 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 FNDC4Q9H6D8 234 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 PAIP2BQ9ULR5 123 aaKnown RBP4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 VWFP04275 2813 aa4.19□□□□□ -1.74
HMGB1P44-201ENST00000508597 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 A0A087WW49 117 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 FAM24AA6NFZ4 105 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR2T8A6NH00 312 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 HMSDA8MTL9 139 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 A8MWP6 167 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 K7EMT4 169 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 BMPR1BO00238 502 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OVOL1O14753 267 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 CD5P06127 495 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 METTL15P1P0C7V9 234 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGLC1P0CG04 106 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 RPL12P30050 165 aaKnown RBP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR10J1P30954 320 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 GPR183P32249 361 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 BMI1P35226 326 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 RND2P52198 227 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 EWSR1Q01844 656 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 SLC38A11Q08AI6 406 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 RAB31Q13636 194 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 VWC2Q2TAL6 325 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR8G2PQ6IF36 304 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF600Q6ZNG1 722 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 C19orf35Q6ZS72 473 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 C18orf65Q6ZTR6 163 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF546Q86UE3 836 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 TCTE3Q8IZS6 198 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 UBAC2Q8NBM4 344 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 INO80EQ8NBZ0 244 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 Q8WTZ3 238 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 MARC2Q969Z3 335 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 AQP10Q96PS8 301 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR5B12Q96R08 314 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 FAM110AQ9BQ89 295 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 GINS3Q9BRX5 216 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM147Q9BVK8 224 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 PARD6GQ9BYG4 376 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 SIGLEC8Q9NYZ4 499 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR5AC2Q9NZP5 309 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 MBD2Q9UBB5 411 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 RNF24Q9Y225 148 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 UFC1Q9Y3C8 167 aa4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 LSM4Q9Y4Z0 139 aaKnown RBP4.18□□□□□ -1.74
HMGB1P44-201ENST00000508597 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 TRAV14DV4A0A0A6YYC5 116 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGHV3-21A0A0B4J1V1 117 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGSF23A1L1A6 192 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZFP92A6NM28 416 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 PPP5D1E7EU14 171 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 TAAR5O14804 337 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 CCNKO75909 580 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 CST7O76096 145 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 TOMM40O96008 361 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGKV1-17P01599 117 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGHV3-23P01764 117 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 RD3LP0DJH9 198 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 PSG1P11464 419 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 AP2S1P53680 142 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 AKR1C1Q04828 323 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR2F1Q13607 317 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF266Q14584 549 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms