RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RFNGQ9Y644 331 aa6.65□□□□□ -1.34
NEDD9-211ENST00000508546 C9orf170A2RU37 121 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 FAM90A26D6RGX4 464 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 GOSR2O14653 212 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 CLN5O75503 358 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 HLA-DRB4P13762 266 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 CXCL3P19876 107 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 SNCAP37840 140 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 EMP1P54849 157 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 UCP3P55916 312 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 SNRPD3P62318 126 aaKnown RBP6.64□□□□□ -1.35
NEDD9-211ENST00000508546 DHODHQ02127 395 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 LPCAT3Q6P1A2 487 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 C16orf54Q6UWD8 224 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 C15orf53Q8NAA6 179 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 MITD1Q8WV92 249 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 ZNF486Q96H40 463 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-211ENST00000508546 TMED3Q9Y3Q3 217 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 HLA-DRB4X5D2U9 266 aa6.64□□□□□ -1.35
NEDD9-211ENST00000508546 TEX13DA0A0J9YY54 714 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 NBDYA0A0U1RRE5 68 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 CRYM-AS1A6NIL9 109 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 SFT2D2O95562 160 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 IGKV1-39P01597 117 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 IGKV1-17P01599 117 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 PIGPP57054 158 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 SUPT4H1P63272 117 aaKnown RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 PHLDA2Q53GA4 152 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 CCDC71LQ8N9Z2 235 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 OR4X1Q8NH49 305 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 COQ8AQ8NI60 647 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
NEDD9-211ENST00000508546 FNDC4Q9H6D8 234 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
NEDD9-211ENST00000508546 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 A0A0B4J2A0 478 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 C1QBP02746 253 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
NEDD9-211ENST00000508546 HTN3P15516 51 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 S100GP29377 79 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 NKX2-1P43699 371 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-211ENST00000508546 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD9-211ENST00000508546 RND3P61587 244 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 ZNRF2Q8NHG8 242 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 ASB13Q8WXK3 278 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 NAA60Q9H7X0 242 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 SHPKQ9UHJ6 478 aa6.62□□□□□ -1.35
NEDD9-211ENST00000508546 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 SMLR1H3BR10 107 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 CCSO14618 274 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 SIX6O95475 246 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 OPRK1P41145 380 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 NKX2-5P52952 324 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-211ENST00000508546 H2BFSP57053 126 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 RAP2BP61225 183 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 SPINK9Q5DT21 86 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 SLC35G3Q8N808 338 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 OR2T35Q8NGX2 323 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 PDCD10Q9BUL8 212 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 PRR13Q9NZ81 148 aa6.61□□□□□ -1.35
NEDD9-211ENST00000508546 YTHDF2Q9Y5A9 579 aaKnown RBP6.61□□□□□ -1.35
NEDD9-211ENST00000508546 LOC102723971A0A1B0GUV8 181 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 HBE1P02100 147 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 OR5AC1P0C628 307 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 P0C879 139 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 IGLC1P0CG04 106 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-211ENST00000508546 DAD1P61803 113 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 SRPXP78539 464 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 MLANAQ16655 118 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 BSXQ3C1V8 233 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 TIGITQ495A1 244 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 GDF5OSQ5U4N7 250 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 ZNF709Q8N972 641 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 OR1S2Q8NGQ3 325 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 Q8WTZ3 238 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 HYLS1Q96M11 299 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 KCNIP3Q9Y2W7 256 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
NEDD9-211ENST00000508546 C3orf85A0A1B0GTC6 90 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 C5orf51A6NDU8 294 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 FAM25EA8MYX2 175 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 BUB3O43684 328 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 ADAP1O75689 374 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 FXYD7P58549 80 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 IZUMO4Q1ZYL8 232 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms