RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PAQR4Q8N4S7 273 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 OR11H4Q8NGC9 324 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 FAM30AQ9NZY2 134 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 LHFPL6Q9Y693 200 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 SELENOKQ9Y6D0 94 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 TRGV1A0A0A0MS02 117 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 C15orf65H3BRN8 121 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 OVOL1O14753 267 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 EFNA2O43921 213 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 PSG2P11465 335 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 DYNLT3P51808 116 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 FAAP20Q6NZ36 180 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 SPSB3Q6PJ21 355 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 PQLC2Q6ZP29 291 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 FGFBP3Q8TAT2 258 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 NPIPB3Q92617 1050 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 TAF15Q92804 592 aaKnown RBP eCLIP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 VOPP1Q96AW1 172 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 SHISA3A0PJX4 238 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 SOCS1O15524 211 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 SRSF10O75494 262 aaKnown RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 CCL3L1P16619 93 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 RPL36AP83881 106 aaKnown RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 FBXL19-AS1Q494R0 122 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 PDZD11Q5EBL8 140 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM170BQ5T4T1 132 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 WDR82Q6UXN9 313 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 RPL36ALQ969Q0 106 aaKnown RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 GAFA1Q96PS6 74 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 VPS25Q9BRG1 176 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM204Q9BSN7 226 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 FGF20Q9NP95 211 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-208ENST00000508342 RYR1P21817 5038 aa2.42□□□□□ -2.02
NEDD4-208ENST00000508342 TRGV11A0A075B6L2 103 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 IGKV3D-20A0A0C4DH25 116 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM272A0A1B0GTI8 110 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 PDE6DO43924 150 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 WISP3O95389 354 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 C1QBP02746 253 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TTRP02766 147 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 GZMBP10144 247 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 CD28P10747 220 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 HOXD3P31249 432 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 CCL18P55774 89 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TNFRSF9Q07011 255 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 CD300CQ08708 224 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 JOSD1Q15040 202 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF562Q6V9R5 426 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 LRTM2Q8N967 370 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 JKAMPQ9P055 326 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TET2Q6N021 2002 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 IGLL1P15814 213 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 EVI2AP22794 236 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FGF8P55075 233 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TCTAP57738 103 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 PKIAP61925 76 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 DUX4L9Q6RFH8 374 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 RCHY1Q96PM5 261 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 VAMP8Q9BV40 100 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 GGACTQ9BVM4 153 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 PXMP4Q9Y6I8 212 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SRCAPQ6ZRS2 3230 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TRBV20OR9-2A0A075B6H5 130 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TSPAN13O95857 204 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 INSP01308 110 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FABP5Q01469 135 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 HGFACQ04756 655 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ICAM4Q14773 271 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF146Q15072 292 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ACTL10Q5JWF8 245 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SRSF12Q8WXF0 261 aaKnown RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 HSPB9Q9BQS6 159 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TXNDC17Q9BRA2 123 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF747Q9BV97 191 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 IGF2RP11717 2491 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 IGKV1D-42A0A075B6H8 117 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 DUXBA0A1W2PPF3 345 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A18PA6NE21 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A16PA6NEW6 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A9PA6NNJ1 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A5PA8MXJ8 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 BUB1B-PAK6H3BSN5 160 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 OR9G9P0C7N8 305 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A15PP0C7V4 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM90A14PP0C7W9 464 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FOXG1P55316 489 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 PPP1R1AQ13522 171 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM187Q14656 261 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ANXA2RQ3ZCQ2 193 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 MRPL54Q6P161 138 aaKnown RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SEM1Q6ZVN7 128 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM126AQ9H061 195 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 MRPL18Q9H0U6 180 aaKnown RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 RPUSD1Q9UJJ7 312 aaKnown RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV1-8P0DP01 117 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms