RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HTTP42858 3142 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 PTPRDP23468 1912 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 IRGMA1A4Y4 181 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF503-AS2A6NEH8 195 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 DNAJC9-AS1A6NH13 148 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF860A6NHJ4 632 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF705GA8MUZ8 300 aaPredicted RBP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 CXCL1P09341 107 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 PYYP10082 97 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 QRFPP83859 136 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF880Q6PDB4 577 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF645Q8N7E2 425 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 C15orf40Q8WUR7 153 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 TAF15Q92804 592 aaKnown RBP eCLIP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 PKMYT1Q99640 499 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 HEXA-AS1Q9H8Q6 139 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 C21orf62Q9NYP8 219 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 NOP16Q9Y3C1 178 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 Q9Y3F1 56 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 SCN5AQ14524 2016 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 NYNRINQ9P2P1 1898 aaKnown RBP5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 NDUFC2-KCTD14E9PQ53 114 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 IGLV2-8P01709 118 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 STPG1Q5TH74 334 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 Q6YL49 198 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 Q6ZRP5 223 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 OR4X2Q8NGF9 303 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 SLC25A2Q9BXI2 301 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 SEC11CQ9BY50 192 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 MIA3Q5JRA6 1907 aa5.61□□□□□ -1.51
PDGFRA-206ENST00000508170 PATJQ8NI35 1801 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 DOCK4Q8N1I0 1966 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 SOCS1O15524 211 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 MT-ATP8P03928 68 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 C10orf91Q5T1B1 145 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 TIMM17AQ99595 171 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 PLA2G2FQ9BZM2 168 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 MKI67P46013 3256 aaKnown RBP5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 NLRC5Q86WI3 1866 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 TRPM7Q96QT4 1865 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 OR51F1A6NGY5 319 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 EPM2AB3EWF7 344 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 WISP3O95389 354 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 GTSCR1Q86UQ5 136 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 MDP1Q86V88 176 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 GPHB5Q86YW7 130 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 LINC01555Q8NAE3 123 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF492Q9P255 531 aa5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 MRPS16Q9Y3D3 137 aaKnown RBP5.6□□□□□ -1.51
PDGFRA-206ENST00000508170 NCKAP5O14513 1909 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 IGHV7-81A0A0B4J1V7 117 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 A0A0D9SG52 128 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 MUC21A0A0G2JKD1 596 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 UQCRQO14949 82 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 PLA2G10O15496 165 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 HRASP01112 189 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 FABP4P15090 132 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 GABARAPL1Q9H0R8 117 aa5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF71Q9NQZ8 489 aaPredicted RBP5.59□□□□□ -1.51
PDGFRA-206ENST00000508170 FAM181BA6NEQ2 426 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 MORN3Q6PF18 240 aaPredicted RBP5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 TMEM252Q8N6L7 170 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 OR4A5Q8NH83 315 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 OTOSQ8NHW6 89 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 AGPAT4-IT1Q9H0P7 198 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 KLK15Q9H2R5 256 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 NAA60Q9H7X0 242 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 V9GYH0 126 aa5.59□□□□□ -1.52
PDGFRA-206ENST00000508170 OOSP1A8MZH6 123 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 TMEM262E9PQX1 116 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 CCL22O00626 93 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 NMBP08949 121 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 SRP14P37108 136 aaKnown RBP5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 PYDC2Q56P42 97 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 PCP2Q8IVA1 136 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 NEUROG1Q92886 237 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 HDHD3Q9BSH5 251 aaPredicted RBP5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 TMEM106BQ9NUM4 274 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 MYO16Q9Y6X6 1858 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 TRBV20-1A0A075B6N2 111 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 A0A0D9SEW6 157 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 LOC285095A0A1B0GVY8 99 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 HLA-DPB1P04440 258 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 SLC25A5P05141 298 aaKnown RBP5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF823P16415 610 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 CRISP3P54108 245 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF79Q15937 498 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF329Q86UD4 541 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 TSLPQ969D9 159 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
PDGFRA-206ENST00000508170 IGLV3-10A0A075B6K4 115 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 LTAP01374 205 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 IGHV3-48P01763 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms