RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 PDZD2O15018 2839 aa12.91□□□□□ -0.34
DDX41-207ENST00000507900 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
DDX41-207ENST00000507900 OR2T8A6NH00 312 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 ADMP35318 185 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
DDX41-207ENST00000507900 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
DDX41-207ENST00000507900 CCDC140Q96MF4 163 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 VPREB3Q9UKI3 123 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 NBPF19A0A087WUL8 3843 aa12.9□□□□□ -0.34
DDX41-207ENST00000507900 TSPAN4O14817 238 aa12.9□□□□□ -0.35
DDX41-207ENST00000507900 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.35
DDX41-207ENST00000507900 C15orf54Q8N8G6 183 aa12.9□□□□□ -0.35
DDX41-207ENST00000507900 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.35
DDX41-207ENST00000507900 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.35
DDX41-207ENST00000507900 DERL1Q9BUN8 251 aa12.9□□□□□ -0.35
DDX41-207ENST00000507900 TMA7Q9Y2S6 64 aaKnown RBP12.9□□□□□ -0.35
DDX41-207ENST00000507900 ZANQ9Y493 2812 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 MYCNOSP40205 109 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 CFHR3Q02985 330 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 ZNF600Q6ZNG1 722 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
DDX41-207ENST00000507900 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 COLCA2A8K830 154 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 C9JCJ5 164 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 GPR183P32249 361 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
DDX41-207ENST00000507900 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 ADIRFQ15847 76 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 LEMD1Q68G75 181 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 Q6ZS46 218 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 ELOVL1Q9BW60 279 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 CTDSP1Q9GZU7 261 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
DDX41-207ENST00000507900 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 IGLV1-40P01703 118 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 TRGV3P03979 118 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 CLEC3BP05452 202 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 HIST1H1EP10412 219 aaKnown RBP12.87□□□□□ -0.35
DDX41-207ENST00000507900 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 ZNF329Q86UD4 541 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 YPEL4Q96NS1 127 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 RNF24Q9Y225 148 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 LY96Q9Y6Y9 160 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 ZFHX3Q15911 3703 aa12.87□□□□□ -0.35
DDX41-207ENST00000507900 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
DDX41-207ENST00000507900 TGOLN2O43493 480 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 CRYBB3P26998 211 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
DDX41-207ENST00000507900 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 ITPR3Q14573 2671 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 IGLC2P0DOY2 106 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 S100A7P31151 101 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
DDX41-207ENST00000507900 RNF212Q495C1 297 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 CLEC19AQ6UXS0 136 aa12.86□□□□□ -0.35
DDX41-207ENST00000507900 BMPR1BO00238 502 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 TPPP2P59282 170 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 KRTAP1-1Q07627 177 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 ISOC2Q96AB3 205 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 RABAC1Q9UI14 185 aa12.85□□□□□ -0.35
DDX41-207ENST00000507900 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
DDX41-207ENST00000507900 HOXA3O43365 443 aaPredicted RBP12.84□□□□□ -0.35
DDX41-207ENST00000507900 CD99P14209 185 aa12.84□□□□□ -0.35
DDX41-207ENST00000507900 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
DDX41-207ENST00000507900 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
DDX41-207ENST00000507900 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
DDX41-207ENST00000507900 HIST1H2BAQ96A08 127 aa12.84□□□□□ -0.35
DDX41-207ENST00000507900 GCN1Q92616 2671 aaKnown RBP12.83□□□□□ -0.36
DDX41-207ENST00000507900 TMEM89A2RUT3 159 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 HELTA6NFD8 242 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 CLDN34H7C241 214 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 CD5LO43866 347 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 RANP62826 216 aaKnown RBP12.83□□□□□ -0.36
DDX41-207ENST00000507900 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 UNC79Q9P2D8 2635 aa12.83□□□□□ -0.36
DDX41-207ENST00000507900 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 PEX7O00628 323 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 IGHG4P01861 327 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 TAS2R60P59551 318 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 TMEM86BQ8N661 226 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 C5orf17Q8NAS9 161 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 IGF2BP2-AS1Q96M15 143 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 Q9H3A6 140 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 CDC42EP3Q9UKI2 254 aa12.82□□□□□ -0.36
DDX41-207ENST00000507900 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms