RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 CD5P06127 495 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 ZNF474Q6S9Z5 364 aaPredicted RBP13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 JPT2Q9H910 190 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 TRAV8-4A0A0B4J246 113 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
SH3TC1-210ENST00000506360 TCRAP04437 139 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 ZNF138P52744 262 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 SRSF6Q13247 344 aaKnown RBP13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 UNQ6494/PRO21346Q6UXR6 183 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 LCNL1Q6ZST4 164 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 CLPSP04118 112 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 ZNF329Q86UD4 541 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 LINC01549A6NIU2 74 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 GATD1Q8NB37 220 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 MDS2Q8NDY4 140 aa13.28□□□□□ -0.28
SH3TC1-210ENST00000506360 TMEM249Q2WGJ8 235 aa13.27□□□□□ -0.28
SH3TC1-210ENST00000506360 SH2D1AO60880 128 aa13.27□□□□□ -0.28
SH3TC1-210ENST00000506360 Q8TAT8 98 aa13.27□□□□□ -0.28
SH3TC1-210ENST00000506360 LHFPL1Q86WI0 220 aa13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 PSCAO43653 123 aa13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 HGFACQ04756 655 aa13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 SSC4DQ8WTU2 575 aa13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 PNRC2Q9NPJ4 139 aaKnown RBP13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
SH3TC1-210ENST00000506360 IGKV1-5P01602 117 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 ATXN8Q156A1 80 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 IGFL4Q6B9Z1 124 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 DTX1Q86Y01 620 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 SMPXQ9UHP9 88 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 TMEM238C9JI98 176 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 PAX4O43316 350 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 COL8A2P25067 703 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 TEX43Q6ZNM6 134 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 AGMATQ9BSE5 352 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 C5orf63A6NC05 138 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 ZNF479Q96JC4 524 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
SH3TC1-210ENST00000506360 C17orf82Q86X59 251 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 DMRTC2Q8IXT2 367 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 USMG5Q96IX5 58 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 MBD3L4A6NDZ8 208 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 MBD3L3A6NE82 208 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 MBD3L5A6NJ08 208 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 GAS1P54826 345 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LCN12Q6JVE5 192 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 MBD3L2Q8NHZ7 208 aaPredicted RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LINC00477Q96M19 166 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 NYNRINQ9P2P1 1898 aaKnown RBP13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LOC285556D6RIA3 1793 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LINC00473A8K010 186 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LY6HO94772 140 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 INSP01308 110 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 HSD52Q0P140 79 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 LYPD2Q6UXB3 125 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 TMEM190Q8WZ59 177 aa13.25□□□□□ -0.29
SH3TC1-210ENST00000506360 PSG3Q16557 428 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 LINC01356Q8N9X3 169 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 KLHDC3Q9BQ90 382 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 CRIM1Q9NZV1 1036 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 A8MWV9 139 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 CXCL1P09341 107 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 BPESC1Q9GZL8 116 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 IGKV1D-17A0A075B6S4 117 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 TOMM40O96008 361 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
SH3TC1-210ENST00000506360 Q6P435 159 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 RASL10AQ92737 203 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 ESPL1Q14674 2120 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 LOC105371267A0A1B0GV96 52 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 SAMD5Q5TGI4 173 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 RNF166Q96A37 237 aaPredicted RBP13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 SLC25A16P16260 332 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 ERCC8Q13216 396 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 HIST1H2BLQ99880 126 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 RHPN1-AS1Q9BWJ2 59 aa13.23□□□□□ -0.29
SH3TC1-210ENST00000506360 TMEM14EPQ6UXP3 125 aa13.22□□□□□ -0.29
SH3TC1-210ENST00000506360 CYTL1Q9NRR1 136 aa13.22□□□□□ -0.29
SH3TC1-210ENST00000506360 LINC00587B1AMM8 73 aa13.22□□□□□ -0.29
SH3TC1-210ENST00000506360 CDK2AP2O75956 126 aa13.22□□□□□ -0.29
SH3TC1-210ENST00000506360 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
SH3TC1-210ENST00000506360 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms