RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 SUMO4Q6EEV6 95 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 ETFRF1Q6IPR1 90 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 ZNF841Q6ZN19 808 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 ZNF788Q6ZQV5 615 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 ZCCHC24Q8N2G6 241 aaKnown RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TMEM167AQ8TBQ9 72 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 FXYD5Q96DB9 178 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 GAFA1Q96PS6 74 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 OR2V2Q96R30 315 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 RNASE7Q9H1E1 156 aaKnown RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 DEFB127Q9H1M4 99 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TNFRSF19Q9NS68 423 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 RPUSD1Q9UJJ7 312 aaKnown RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 AMMECR1Q9Y4X0 333 aaPredicted RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 ESPL1Q14674 2120 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 AHCTF1Q8WYP5 2266 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 IGHV1-69-2A0A0G2JMI3 117 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 CCL25O15444 150 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 OR7C2O60412 319 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 IGLV2-23P01705 113 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 HLA-DRB1P01911 266 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 CRYGBP07316 175 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 SRIP30626 198 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 CDKN1BP46527 198 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 SLAQ13239 276 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TNXAQ16473 311 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 IBA57Q5T440 356 aaKnown RBP3.12□□□□□ -1.91
CLTC-209ENST00000498711 SPATA12Q7Z6I5 190 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 VKORC1L1Q8N0U8 176 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TPRX1Q8N7U7 411 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TEX45Q8NA69 505 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 C9orf106Q8NAJ2 232 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 TMEM178AQ8NBL3 297 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 NUP35Q8NFH5 326 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 STARD4Q96DR4 205 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 NDFIP1Q9BT67 221 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 DNAJC4Q9NNZ3 241 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 SLC35D1Q9NTN3 355 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 NAT8BQ9UHF3 227 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 ZNF835Q9Y2P0 537 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 PAM16Q9Y3D7 125 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 COX11Q9Y6N1 276 aa3.12□□□□□ -1.91
CLTC-209ENST00000498711 DOCK10Q96BY6 2186 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 KNTC1P50748 2209 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 LOC105371242A0A075B767 164 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 IGHV2-70DA0A0C4DH43 119 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 TCRBV4S1A1TA0A5B7 111 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 URB1O60287 2271 aaKnown RBP3.11□□□□□ -1.91
CLTC-209ENST00000498711 LYZL6O75951 148 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 NHLRC4P0CG21 123 aaPredicted RBP3.11□□□□□ -1.91
CLTC-209ENST00000498711 PMCHP20382 165 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 USF1P22415 310 aaPredicted RBP3.11□□□□□ -1.91
CLTC-209ENST00000498711 GLRXP35754 106 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 MEF2CQ06413 473 aaPredicted RBP3.11□□□□□ -1.91
CLTC-209ENST00000498711 LRRC10Q5BKY1 277 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 MORN5Q5VZ52 161 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 DOLPP1Q86YN1 238 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 MED12LQ86YW9 2145 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 C11orf42Q8N5U0 333 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 OR2Z1Q8NG97 314 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 OR1L4Q8NGR5 311 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 DPF1Q92782 380 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 SAMD10Q9BYL1 202 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 GAL3ST2Q9H3Q3 398 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 ST20Q9HBF5 79 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 GNG12Q9UBI6 72 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 COL12A1Q99715 3063 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 A0A1W2PN81 502 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 PEX7O00628 323 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 LTAP01374 205 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 MYOD1P15172 320 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 IGLL1P15814 213 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 HNF1AP20823 631 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 CEACAM3P40198 252 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 AMTP48728 403 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 DLX6P56179 175 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 BHLHA15Q7RTS1 189 aaPredicted RBP3.11□□□□□ -1.91
CLTC-209ENST00000498711 SARAFQ96BY9 339 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 TRGV9Q99603 122 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 MS4A6AQ9H2W1 248 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 PLEKHA3Q9HB20 300 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 ENY2Q9NPA8 101 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 EPDR1Q9UM22 224 aa3.11□□□□□ -1.91
CLTC-209ENST00000498711 NBEAQ8NFP9 2946 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 RBMXL2O75526 392 aaKnown RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 PPBPP02775 128 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 OR5AL1P0C617 328 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 CA7P43166 264 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 KRTDAPP60985 99 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 TIMM23BQ5SRD1 257 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 MOB3BQ86TA1 216 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 OR9G1Q8NH87 305 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 SNRNP40Q96DI7 357 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms