RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 IGKV1-27A0A075B6S5 117 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 D6R8Y8 96 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 ANAPC10Q9UM13 185 aa12.4□□□□□ -0.42
C4A-259ENST00000498271 M0R2P5 195 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 NAA38Q9BRA0 125 aaKnown RBP12.39□□□□□ -0.43
C4A-259ENST00000498271 TCRAP04437 139 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
C4A-259ENST00000498271 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
C4A-259ENST00000498271 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 FAM201AQ5SY85 155 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 SPATA31B1PQ5VZV4 182 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
C4A-259ENST00000498271 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
C4A-259ENST00000498271 F8W1H4 67 aa12.38□□□□□ -0.43
C4A-259ENST00000498271 CDKN1AP38936 164 aa12.38□□□□□ -0.43
C4A-259ENST00000498271 LILRA1O75019 489 aa12.38□□□□□ -0.43
C4A-259ENST00000498271 PRTN3P24158 256 aa12.38□□□□□ -0.43
C4A-259ENST00000498271 SPAG8Q99932 426 aaPredicted RBP12.38□□□□□ -0.43
C4A-259ENST00000498271 TMEM42Q69YG0 159 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 TRGV9Q99603 122 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 SPRR3Q9UBC9 169 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 CDKN1BP46527 198 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 Q0VFX4 171 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 TMEM155Q4W5P6 130 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 TEX43Q6ZNM6 134 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 LYPD1Q8N2G4 141 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 FAM216BQ8N7L0 139 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 CD33P20138 364 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 S100A7L2Q5SY68 101 aa12.37□□□□□ -0.43
C4A-259ENST00000498271 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 K7EP34 96 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 CT83Q5H943 113 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 NPFFR1Q9GZQ6 430 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 K7EP13 123 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 TOMM40O96008 361 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 ASCL4Q6XD76 172 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 IGHV2-26A0A0B4J1V2 119 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 OVOL2Q9BRP0 275 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
C4A-259ENST00000498271 CD59P13987 128 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
C4A-259ENST00000498271 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 TRBV20-1A0A075B6N2 111 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 MLNRO43193 412 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 TRGV3P03979 118 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 FOXF2Q12947 444 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 CD300EQ496F6 205 aaPredicted RBP12.35□□□□□ -0.43
C4A-259ENST00000498271 BMPERQ8N8U9 685 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 NBR2O15453 112 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 LGALS1P09382 135 aaKnown RBP12.35□□□□□ -0.43
C4A-259ENST00000498271 Q6ZWC4 215 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 ZNF492Q9P255 531 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 RTTNQ86VV8 2226 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 EVI2AP22794 236 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
C4A-259ENST00000498271 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
C4A-259ENST00000498271 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 LYZL1Q6UWQ5 148 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
C4A-259ENST00000498271 IGKV1D-33P01593 117 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 IGKV1-33P01594 117 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 ZNF48Q96MX3 618 aaPredicted RBP12.34□□□□□ -0.43
C4A-259ENST00000498271 LY6DQ14210 128 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 IGHV3-35A0A0C4DH35 117 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 C15orf62A8K5M9 175 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 ZC2HC1BQ5TFG8 222 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
C4A-259ENST00000498271 WISP1O95388 367 aa12.33□□□□□ -0.43
C4A-259ENST00000498271 CEP250Q9BV73 2442 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 TRAV12-3A0A0B4J271 114 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 IL18BPO95998 194 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 TFF1P04155 84 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 NTF4P34130 210 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 OVOL1O14753 267 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 B3GALT5-AS1P59052 145 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 NBL1P41271 181 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 LYPD6BQ8NI32 183 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
C4A-259ENST00000498271 HELZP42694 1942 aaKnown RBP12.32□□□□□ -0.44
C4A-259ENST00000498271 LINC01560Q8TB33 94 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 LIME1Q9H400 295 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms