RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 IGHV3-66A0A0C4DH42 116 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 METTL15P1P0C7V9 234 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 GPX4P36969 197 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-209ENST00000498058 SULT1A1P50225 295 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
PRKCB-209ENST00000498058 BAXQ07812 192 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 INO80EQ8NBZ0 244 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-209ENST00000498058 TMEM170AQ8WVE7 144 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 RARRES2Q99969 163 aa13.56□□□□□ -0.24
PRKCB-209ENST00000498058 FAM24AA6NFZ4 105 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 GNG7O60262 68 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 MLANAQ16655 118 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 OR8G2PQ6IF36 304 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 ZNF546Q86UE3 836 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 TMEM252Q8N6L7 170 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 DNAH6Q9C0G6 4158 aa13.55□□□□□ -0.24
PRKCB-209ENST00000498058 DEFB4AO15263 64 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 PFDN1O60925 122 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 DFFBO76075 338 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 RPL12P30050 165 aaKnown RBP13.54□□□□□ -0.24
PRKCB-209ENST00000498058 LEMD1Q68G75 181 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 TMEM217Q8N7C4 229 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 OR11H2Q8NH07 326 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 GATAD1Q8WUU5 269 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 KRTAP17-1Q9BYP8 105 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 MS4A6AQ9H2W1 248 aa13.54□□□□□ -0.24
PRKCB-209ENST00000498058 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRKCB-209ENST00000498058 IGSF23A1L1A6 192 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 S100A11P31949 105 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 NPBWR1P48145 328 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 CMC4P56277 68 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-209ENST00000498058 DEFB131AP59861 70 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 DLK1P80370 383 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 Q5BKY6 102 aa13.53□□□□□ -0.24
PRKCB-209ENST00000498058 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-209ENST00000498058 FNDC10F2Z333 226 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 CST7O76096 145 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 GIG44P09565 113 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-209ENST00000498058 PRR20EP86478 221 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 PRR20CP86479 221 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 PRR20DP86480 221 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 PRR20BP86481 221 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 PRR20AP86496 221 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 ATP6V1FQ16864 119 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 LGALS9CQ6DKI2 356 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 ZNF600Q6ZNG1 722 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 OR1S2Q8NGQ3 325 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 AQP10Q96PS8 301 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
PRKCB-209ENST00000498058 FBXL17Q9UF56 701 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 TNFSF18Q9UNG2 199 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 HERC2O95714 4834 aa13.52□□□□□ -0.25
PRKCB-209ENST00000498058 HMSDA8MTL9 139 aa13.51□□□□□ -0.25
PRKCB-209ENST00000498058 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-209ENST00000498058 C1QBP02746 253 aa13.51□□□□□ -0.25
PRKCB-209ENST00000498058 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
PRKCB-209ENST00000498058 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
PRKCB-209ENST00000498058 HSPB11Q9Y547 144 aa13.51□□□□□ -0.25
PRKCB-209ENST00000498058 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 SMCO3A2RU48 225 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 PMS2P5A8MQ11 134 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 G3V3Q6 166 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 AKR1C1Q04828 323 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 ACOT7LQ6ZUV0 252 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 OR4X1Q8NH49 305 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 ACY3Q96HD9 319 aa13.5□□□□□ -0.25
PRKCB-209ENST00000498058 ARPC5O15511 151 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 RND2P52198 227 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 PAFAH1B2P68402 229 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 NHLH2Q02577 135 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 OR2F1Q13607 317 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 OR5C1Q8NGR4 320 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 HYLS1Q96M11 299 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 TMEM147Q9BVK8 224 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 MFFQ9GZY8 342 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 UQCC1Q9NVA1 299 aa13.49□□□□□ -0.25
PRKCB-209ENST00000498058 TRAV2A0A0B4J234 112 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 DNASE2O00115 360 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-209ENST00000498058 CLN5O75503 358 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 FABP1P07148 127 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 GAMTQ14353 236 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 Q8NAQ8 132 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 NPVFQ9HCQ7 196 aa13.48□□□□□ -0.25
PRKCB-209ENST00000498058 K7EQG2 157 aa13.47□□□□□ -0.25
PRKCB-209ENST00000498058 IGKV1-17P01599 117 aa13.47□□□□□ -0.25
PRKCB-209ENST00000498058 CD5P06127 495 aa13.47□□□□□ -0.25
PRKCB-209ENST00000498058 RBMY1A1P0DJD3 496 aaKnown RBP13.47□□□□□ -0.25
PRKCB-209ENST00000498058 RBMY1CP0DJD4 496 aa13.47□□□□□ -0.25
PRKCB-209ENST00000498058 AP2S1P53680 142 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-209ENST00000498058 RPL11P62913 178 aaKnown RBP13.47□□□□□ -0.25
PRKCB-209ENST00000498058 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
PRKCB-209ENST00000498058 ZNF345Q14585 488 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms