RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZANQ9Y493 2812 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 TRBV9A0A0B4J1U6 114 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 A0A1W2PRE2 83 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 C7orf77A4D0Y5 90 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 GGTLC3B5MD39 225 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 H3BUA1 57 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 OR2C1O95371 312 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 TRGV3P03979 118 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 IGF1P05019 195 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 FCGR2BP31994 310 aaPredicted RBP6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 IER3P46695 156 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 TMEM95Q3KNT9 176 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 C8orf86Q6ZUL3 223 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 S100A7AQ86SG5 101 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 FXYD5Q96DB9 178 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 MS4A10Q96PG2 267 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 SMCO4Q9NRQ5 59 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 CCDC168Q8NDH2 2452 aa6.3□□□□□ -1.4
PDZRN3-212ENST00000498048 TRBV7-1A0A0A6YYK4 115 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 WI2-2373I1.2A0A1W2PRP0 233 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 BMPR1BO00238 502 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 TSPAN4O14817 238 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 TGOLN2O43493 480 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 USF2Q15853 346 aaPredicted RBP6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 LEMD1Q68G75 181 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 Q6YL49 198 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF491Q8N8L2 437 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 Q8WTZ3 238 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 BLNKQ8WV28 456 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 NOL4LQ96MY1 436 aaPredicted RBP6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 SDF2L1Q9HCN8 221 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF580Q9UK33 172 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 PDZD2O15018 2839 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 UNC79Q9P2D8 2635 aa6.29□□□□□ -1.4
PDZRN3-212ENST00000498048 TLN2Q9Y4G6 2542 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 A0A087WWC5 75 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 B4DEV8 164 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 CD5LO43866 347 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 NDUFB4O95168 129 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 PF4V1P10720 104 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 HNF1AP20823 631 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 S100A7P31151 101 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 SRP14P37108 136 aaKnown RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 BLCAPP62952 87 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 ATP5G2Q06055 141 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 TMEM241Q24JQ0 296 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 CLEC19AQ6UXS0 136 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 BPIFA4PQ86YQ2 179 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 TCEAL7Q9BRU2 100 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 CHRDL1Q9BU40 450 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 NPFFR1Q9GZQ6 430 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 MRPL27Q9P0M9 148 aaKnown RBP6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 TMEM14CQ9P0S9 112 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 RABAC1Q9UI14 185 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 RPH3ALQ9UNE2 315 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 RNF24Q9Y225 148 aa6.28□□□□□ -1.4
PDZRN3-212ENST00000498048 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 C9JCJ5 164 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 PEX7O00628 323 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 SLC25A5P05141 298 aaKnown RBP6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 CTSGP08311 255 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 NPPCP23582 126 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ADMP35318 185 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ARL3P36405 182 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 CFHR3Q02985 330 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 CENPWQ5EE01 88 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 Q6ZS46 218 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ZNF329Q86UD4 541 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 SIGLECL1Q8N7X8 197 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 C15orf54Q8N8G6 183 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ATP6V0BQ99437 205 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 ELOVL1Q9BW60 279 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 PRSS22Q9GZN4 317 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 PRELID1Q9Y255 219 aa6.27□□□□□ -1.41
PDZRN3-212ENST00000498048 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 FASNP49327 2511 aaKnown RBP6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 TRBV20OR9-2A0A075B6H5 130 aa6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 IGHV3OR16-8A0A075B7F1 116 aa6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 IGHV3-35A0A0C4DH35 117 aa6.26□□□□□ -1.41
PDZRN3-212ENST00000498048 PGPEP1LA6NFU8 196 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms