RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
CHRNA4-206ENST00000498043 IGHV3-35A0A0C4DH35 117 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 GGTLC3B5MD39 225 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 RHEBQ15382 184 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 SUN5Q8TC36 379 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 Q8WTZ3 238 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 ARL2-SNX15V9GYD0 113 aa13.85□□□□□ -0.19
CHRNA4-206ENST00000498043 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 WI2-2373I1.2A0A1W2PRP0 233 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 NDUFB4O95168 129 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 TPPP2P59282 170 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 CLEC19AQ6UXS0 136 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 OR2C1O95371 312 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 CLEC3BP05452 202 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 GP9P14770 177 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 PPIFP30405 207 aaKnown RBP13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 ATP5G2Q06055 141 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 KRTAP1-1Q07627 177 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
CHRNA4-206ENST00000498043 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 STXBP6Q8NFX7 210 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 BLNKQ8WV28 456 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 DUX5Q96PT3 197 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 IGHV3OR16-8A0A075B7F1 116 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 H3BRN7 92 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 NAT8Q9UHE5 227 aa13.83□□□□□ -0.2
CHRNA4-206ENST00000498043 TRBV7-1A0A0A6YYK4 115 aa13.82□□□□□ -0.2
CHRNA4-206ENST00000498043 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
CHRNA4-206ENST00000498043 PF4V1P10720 104 aa13.82□□□□□ -0.2
CHRNA4-206ENST00000498043 SIGLECL1Q8N7X8 197 aa13.82□□□□□ -0.2
CHRNA4-206ENST00000498043 H3BTX0 84 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 SRP14P37108 136 aaKnown RBP13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 SUMO1P63165 101 aaKnown RBP13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 PNRC1Q12796 327 aaPredicted RBP13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 ADIRFQ15847 76 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 TMEM241Q24JQ0 296 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 LCNL1Q6ZST4 164 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 PRDM13Q9H4Q3 707 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 TGOLN2O43493 480 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF414Q96IQ9 312 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 KLK15Q9H2R5 256 aa13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
CHRNA4-206ENST00000498043 PPP5D1E7EU14 171 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 H3BUA1 57 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 TSPAN4O14817 238 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 CD5LO43866 347 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 CFHR3Q02985 330 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF329Q86UD4 541 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
CHRNA4-206ENST00000498043 CRYBB3P26998 211 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 TEX29Q8N6K0 151 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 SMCO4Q9NRQ5 59 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 TRBV20OR9-2A0A075B6H5 130 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 IGLV1-40P01703 118 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 NBEAP1P0C6P0 100 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 RPL23P62829 140 aaKnown RBP13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 ISOC2Q96AB3 205 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 ELOVL1Q9BW60 279 aa13.79□□□□□ -0.2
CHRNA4-206ENST00000498043 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF98A6NK75 572 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 IGHV3-11P01762 117 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF343Q6P1L6 599 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 TOMM20LQ6UXN7 152 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 ZFAND3Q9H8U3 227 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 AURKAIP1Q9NWT8 199 aaPredicted RBP13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 TMEM14CQ9P0S9 112 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 BMPR1BO00238 502 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF702PQ9H963 129 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 ZNF580Q9UK33 172 aa13.78□□□□□ -0.2
CHRNA4-206ENST00000498043 SONP18583 2426 aaKnown RBP13.77□□□□□ -0.2
CHRNA4-206ENST00000498043 BRI3O95415 125 aa13.77□□□□□ -0.21
CHRNA4-206ENST00000498043 TRBV12-3P01733 135 aa13.77□□□□□ -0.21
CHRNA4-206ENST00000498043 RPL35P42766 123 aaKnown RBP13.77□□□□□ -0.21
CHRNA4-206ENST00000498043 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
CHRNA4-206ENST00000498043 ZNF586Q9NXT0 402 aa13.77□□□□□ -0.21
CHRNA4-206ENST00000498043 S100A7AQ86SG5 101 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 B4DEV8 164 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 HNF1AP20823 631 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 ARL3P36405 182 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 OR4F17Q8NGA8 305 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 ACANP16112 2415 aa13.76□□□□□ -0.21
CHRNA4-206ENST00000498043 A0A087WWC5 75 aa13.75□□□□□ -0.21
CHRNA4-206ENST00000498043 HIST1H1EP10412 219 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-206ENST00000498043 RAB9AP51151 201 aa13.75□□□□□ -0.21
CHRNA4-206ENST00000498043 GNG5P63218 68 aa13.75□□□□□ -0.21
CHRNA4-206ENST00000498043 RELQ04864 619 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms