RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ARL3P36405 182 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 LYZP61626 148 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 RELQ04864 619 aaPredicted RBP10.93□□□□□ -0.66
VPS26A-209ENST00000497564 LCN15Q6UWW0 184 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
VPS26A-209ENST00000497564 OR4X2Q8NGF9 303 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 OR1B1Q8NGR6 318 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
VPS26A-209ENST00000497564 HIGD1AQ9Y241 93 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
VPS26A-209ENST00000497564 IL4P05112 153 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 ORM2P19652 201 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 PROK1P58294 105 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 TAS2R45P59539 299 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 SPATA31B1PQ5VZV4 182 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 MIR17HGQ75NE6 70 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 TECRQ9NZ01 308 aaKnown RBP10.92□□□□□ -0.66
VPS26A-209ENST00000497564 DOK5Q9P104 306 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
VPS26A-209ENST00000497564 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
VPS26A-209ENST00000497564 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 PPP5D1E7EU14 171 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 CXorf1O96002 111 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 LGALS1P09382 135 aaKnown RBP10.91□□□□□ -0.66
VPS26A-209ENST00000497564 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
VPS26A-209ENST00000497564 CCL20P78556 96 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 GNB4Q9HAV0 340 aa10.91□□□□□ -0.66
VPS26A-209ENST00000497564 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS26A-209ENST00000497564 H3BRN7 92 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 BMPR1BO00238 502 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 NDUFA4O00483 81 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
VPS26A-209ENST00000497564 GGCTO75223 188 aaKnown RBP10.9□□□□□ -0.66
VPS26A-209ENST00000497564 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 S100A7P31151 101 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 PSMB3P49720 205 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 PPT1P50897 306 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-209ENST00000497564 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-209ENST00000497564 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 UHRF2Q96PU4 802 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 CITED1Q99966 193 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 SCRT1Q9BWW7 348 aa10.9□□□□□ -0.66
VPS26A-209ENST00000497564 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-209ENST00000497564 ANKRD34BA5PLL1 514 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 I3L521 148 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS26A-209ENST00000497564 ARL14EPLP0DKL9 152 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 PRR31Q5SQ13 230 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 MORN5Q5VZ52 161 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 SUN5Q8TC36 379 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 PBDC1Q9BVG4 233 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
VPS26A-209ENST00000497564 A0A1B0GV50 99 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 GCHFRP30047 84 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 TAGLN2P37802 199 aaKnown RBP10.88□□□□□ -0.67
VPS26A-209ENST00000497564 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 C4orf3Q8WVX3 66 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 SMDT1Q9H4I9 107 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 MANBALQ9NQG1 85 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
VPS26A-209ENST00000497564 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
VPS26A-209ENST00000497564 IFNA1P01562 189 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 CD5P06127 495 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 GUK1Q16774 197 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 TMEM14CQ9P0S9 112 aa10.87□□□□□ -0.67
VPS26A-209ENST00000497564 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 ZNF98A6NK75 572 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 OR7C2O60412 319 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
VPS26A-209ENST00000497564 BCL2P10415 239 aa10.86□□□□□ -0.67
VPS26A-209ENST00000497564 CRYBB3P26998 211 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms