RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 ZFAND6Q6FIF0 208 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 ACOT7LQ6ZUV0 252 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 STXBP6Q8NFX7 210 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 GGACTQ9BVM4 153 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 WDR12Q9GZL7 423 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 C11orf68Q9H3H3 251 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 PTTG2Q9NZH5 202 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 BIRC6Q9NR09 4857 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 A8MTW9 85 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 H3BMM0 161 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 H3BP45 60 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 DEDDO75618 318 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 ZNF688P0C7X2 276 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 SPP1P10451 314 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 NPVFQ9HCQ7 196 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 NUDT15Q9NV35 164 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 FBXL17Q9UF56 701 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 PFDN2Q9UHV9 154 aa7.93□□□□□ -1.14
SHROOM3-210ENST00000497440 TRAV6A0A075B6T7 132 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 ZNF98A6NK75 572 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 UPK1BO75841 260 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 CCNKO75909 580 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 GATA2P23769 480 aaPredicted RBP7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 SELENOTP62341 195 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 C12orf45Q8N5I9 185 aaPredicted RBP7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 Q8NAQ8 132 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 RARRES2Q99969 163 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 X6R8D5 127 aa7.92□□□□□ -1.14
SHROOM3-210ENST00000497440 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 FAM240BA0A1B0GVZ2 78 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 ISLRO14498 428 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 MRPS12O15235 138 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 SSSCA1O60232 199 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 HLA-DRB4P13762 266 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 C4BPBP20851 252 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 PSMB3P49720 205 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 SNRPD3P62318 126 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 OR2F1Q13607 317 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 VWC2Q2TAL6 325 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 PATE2Q6UY27 113 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 STHQ8IWL8 128 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 BPIFCQ8NFQ6 507 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 OR11H2Q8NH07 326 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 CHAC2Q8WUX2 184 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 C2orf50Q96LR7 162 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 SEC22CQ9BRL7 303 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 PBDC1Q9BVG4 233 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 HLA-DRB4X5D2U9 266 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
SHROOM3-210ENST00000497440 H3BRN7 92 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 CA1P00915 261 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 LYZP61626 148 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 ZNF846Q147U1 533 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 PSMG4Q5JS54 123 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 ACTL10Q5JWF8 245 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 OR10P1Q8NGE3 313 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 GPR82Q96P67 336 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 MARVELD1Q9BSK0 173 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 SHANK2-AS3Q9BTD1 123 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 SAV1Q9H4B6 383 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 BATF3Q9NR55 127 aa7.9□□□□□ -1.14
SHROOM3-210ENST00000497440 TRAV8-2A0A0B4J237 113 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 CCSO14618 274 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 LINC00869P0C866 280 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 RBMY1A1P0DJD3 496 aaKnown RBP7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 RBMY1CP0DJD4 496 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 MEOX2P50222 304 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 PXDC1Q5TGL8 231 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 GDF5OSQ5U4N7 250 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 SPATA31B1PQ5VZV4 182 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 MZT2BQ6NZ67 158 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 TEPPQ6URK8 271 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF705AQ6ZN79 300 aaPredicted RBP7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 FOXI2Q6ZQN5 318 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 TMEM217Q8N7C4 229 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF709Q8N972 641 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 NEU1Q99519 415 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 SLC25A39Q9BZJ4 359 aaPredicted RBP7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 SLC25A32Q9H2D1 315 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 GSKIPQ9P0R6 139 aa7.89□□□□□ -1.15
SHROOM3-210ENST00000497440 A0A087X0K7 114 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 MIFP14174 115 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 ORM2P19652 201 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PRR20EP86478 221 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PRR20CP86479 221 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PRR20DP86480 221 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PRR20BP86481 221 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PRR20AP86496 221 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 AMTNQ6UX39 209 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms