RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 POLR2HP52434 150 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 RAB4BP61018 213 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 EIF5AP63241 154 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 RHEBQ15382 184 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 OR8B8Q15620 311 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 NNATQ16517 81 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 Q1T7F1 81 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 RRN3P1Q2M238 152 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 DEFB115Q30KQ5 88 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 CCDC153Q494R4 210 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 KHDC3LQ587J8 217 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 BRMS1LQ5PSV4 323 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 Q6ZRN7 208 aaPredicted RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 Q6ZSA8 131 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 C7orf65Q6ZTY9 151 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 GRINAQ7Z429 371 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 C12orf29Q8N999 325 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM35BQ8NCS4 154 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 OR4E2Q8NGC2 313 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 OR5A1Q8NGJ0 315 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 OR13C6PQ8NH95 151 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 STAG3L4Q8TBR4 150 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 WFDC5Q8TCV5 224 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 PYDC1Q8WXC3 89 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 BORCS5Q969J3 196 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 NAA38Q9BRA0 125 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 YIPF3Q9GZM5 350 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM133Q9H2Q1 129 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 CST9LQ9H4G1 147 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 LYRM2Q9NU23 88 aaPredicted RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 OR52A1Q9UKL2 312 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 EPDR1Q9UM22 224 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TONSLQ96HA7 1378 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 PTPRGP23470 1445 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 FMN1Q68DA7 1419 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 MBD5Q9P267 1494 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 KDM5CP41229 1560 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TRPM1Q7Z4N2 1603 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 ARHGEF28Q8N1W1 1705 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 NUP98P52948 1817 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 VIRMAQ69YN4 1812 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TANC2Q9HCD6 1990 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 HEATR1Q9H583 2144 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 ANKRD31Q8N7Z5 1873 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 PLXNA4Q9HCM2 1894 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 QRICH2Q9H0J4 1663 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 MED1Q15648 1581 aaPredicted RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 IGKV1D-42A0A075B6H8 117 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 LOC100130705A0A1B0GUX0 176 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SPAARA0A1B0GVQ0 90 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 MAP1LC3B2A6NCE7 125 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 B4DSR2 109 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 G3V2T6 193 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 H7C1C5 153 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 UBBP0CG47 229 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SCGB1A1P11684 91 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SRP14P37108 136 aaKnown RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 AKR1C3P42330 323 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 TCTAP57738 103 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 DNAJB13P59910 316 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 LCN6P62502 163 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF846Q147U1 533 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 ELOBQ15370 118 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 TSNQ15631 228 aaKnown RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SMIM21Q3B7S5 101 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM128Q5BJH2 165 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF826PQ6ZT77 177 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 COA5Q86WW8 74 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 C10orf126Q8N4M7 172 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 LINC00471Q8N535 108 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 C3orf56Q8N813 242 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 OR4D11Q8NGI4 311 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 THEM6Q8WUY1 208 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 MBD3L1Q8WWY6 194 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 MAFIPQ8WZ33 124 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SLAMF6Q96DU3 332 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF625Q96I27 306 aaPredicted RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 Q96M85 177 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 LYSMD1Q96S90 227 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SERPINI1Q99574 410 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 HIST1H2BLQ99880 126 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 EFCAB11Q9BUY7 163 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 MAP1LC3BQ9GZQ8 125 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SH3BGRL3Q9H299 93 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 BIN3Q9NQY0 253 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 BATF3Q9NR55 127 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 OTORQ9NRC9 128 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 NHP2Q9NX24 153 aaKnown RBP0.76□□□□□ -2.29
VPS26A-208ENST00000497022 RASL12Q9NYN1 266 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 SSR3Q9UNL2 185 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 RNF11Q9Y3C5 154 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 KIAA1549Q9HCM3 1950 aa0.76□□□□□ -2.29
VPS26A-208ENST00000497022 NUP210Q8TEM1 1887 aaPredicted RBP0.75□□□□□ -2.29
VPS26A-208ENST00000497022 WDR97A6NE52 1622 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 GLI3P10071 1580 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 CEP164Q9UPV0 1460 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 FAM135BQ49AJ0 1406 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 RIC1Q4ADV7 1423 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms