RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LYRM1O43325 122 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 ID1P41134 155 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 MEOX2P50222 304 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 OR8I2Q8N0Y5 310 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-213ENST00000496347 CCDC32Q9BV29 185 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
HDAC4-213ENST00000496347 H3BMM0 161 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 ISLRO14498 428 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 SOCS3O14543 225 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-213ENST00000496347 LINC00299Q6ZSB3 139 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 TMEM144Q7Z5S9 345 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 SMIM8Q96KF7 97 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 WDR12Q9GZL7 423 aaKnown RBP11.43□□□□□ -0.58
HDAC4-213ENST00000496347 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 TBC1D24Q9ULP9 559 aa11.43□□□□□ -0.58
HDAC4-213ENST00000496347 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 TSC22D2O75157 780 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 GALR1P47211 349 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 TAS2R30P59541 319 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 SPATA31B1PQ5VZV4 182 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 FOXI2Q6ZQN5 318 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 CSNK1G2-AS1Q8NCQ2 148 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 GPR82Q96P67 336 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 TMEM147Q9BVK8 224 aa11.42□□□□□ -0.58
HDAC4-213ENST00000496347 IGHV4-28A0A0C4DH34 117 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 PLA2G10O15496 165 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
HDAC4-213ENST00000496347 DLK1P80370 383 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 ZBTB8BQ8NAP8 495 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-213ENST00000496347 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 SLC25A32Q9H2D1 315 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 SAV1Q9H4B6 383 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-213ENST00000496347 NUDT15Q9NV35 164 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 RCL1Q9Y2P8 373 aaKnown RBP11.41□□□□□ -0.58
HDAC4-213ENST00000496347 X6R8D5 127 aa11.41□□□□□ -0.58
HDAC4-213ENST00000496347 ZNF98A6NK75 572 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 DEFB4AO15263 64 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 SCGB1D2O95969 90 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 SELENOTP62341 195 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 CLEC5AQ9NY25 188 aa11.4□□□□□ -0.58
HDAC4-213ENST00000496347 EPPK1P58107 5090 aaKnown RBP11.4□□□□□ -0.58
HDAC4-213ENST00000496347 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 K7EPK0 472 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 LY6G6CO95867 125 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 TCRBP04435 133 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 ORM2P19652 201 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 PAX9P55771 341 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF846Q147U1 533 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 CYP2G1PQ6ZSU1 146 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 S100A7AQ86SG5 101 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 OR10P1Q8NGE3 313 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 OR1B1Q8NGR6 318 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 LINC00052Q96N35 136 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 MGAT4CQ9UBM8 478 aa11.39□□□□□ -0.59
HDAC4-213ENST00000496347 H3BRN7 92 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 IL5P05113 134 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 LINC00869P0C866 280 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
HDAC4-213ENST00000496347 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 TCTAP57738 103 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 PLP1P60201 277 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
HDAC4-213ENST00000496347 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF431Q8TF32 576 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-213ENST00000496347 GGACTQ9BVM4 153 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 GSKIPQ9P0R6 139 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 KMT2AQ03164 3969 aa11.38□□□□□ -0.59
HDAC4-213ENST00000496347 TRAV6A0A075B6T7 132 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 MBPP02686 304 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-213ENST00000496347 GATA2P23769 480 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-213ENST00000496347 RAP2BP61225 183 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF705AQ6ZN79 300 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-213ENST00000496347 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 C2CD4CQ8TF44 421 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 S100ZQ8WXG8 99 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 SHANK2-AS3Q9BTD1 123 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 SCRT1Q9BWW7 348 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-213ENST00000496347 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 RNF24Q9Y225 148 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 HIGD1AQ9Y241 93 aa11.37□□□□□ -0.59
HDAC4-213ENST00000496347 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 HYPMO75409 117 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 CCNKO75909 580 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 RPL7P18124 248 aaKnown RBP11.36□□□□□ -0.59
HDAC4-213ENST00000496347 RRAS2P62070 204 aaPredicted RBP11.36□□□□□ -0.59
HDAC4-213ENST00000496347 PXDC1Q5TGL8 231 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms