RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 EFCAB11Q9BUY7 163 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 CISHQ9NSE2 258 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 TXNL4BQ9NX01 149 aaKnown RBP2.62□□□□□ -1.99
CCDC39-207ENST00000495817 COPZ2Q9P299 210 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 PYCARDQ9ULZ3 195 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 ROBO3Q96MS0 1386 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 DNAH14Q0VDD8 3507 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 GBF1Q92538 1859 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 A0A087WX48 190 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 hADV38S2A0JD32 116 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 C17orf51A8MQB3 221 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 ODF3BA8MYP8 253 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 TRAPPC2LH3BP13 241 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 UBFD1O14562 309 aaKnown RBP2.61□□□□□ -1.99
CCDC39-207ENST00000495817 IFNA10P01566 189 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 C1QBP02746 253 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 RBP1P09455 135 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 CRHBPP24387 322 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 BLVRBP30043 206 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-207ENST00000495817 SDC4P31431 198 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 MARCKSL1P49006 195 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 GRK1Q15835 563 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 C1orf194Q5T5A4 169 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 C1orf174Q8IYL3 243 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 KLK6Q92876 244 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 C14orf144Q96I85 54 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 GPER1Q99527 375 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 FAM96AQ9H5X1 160 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 MRPL27Q9P0M9 148 aaKnown RBP2.61□□□□□ -1.99
CCDC39-207ENST00000495817 PRNDQ9UKY0 176 aa2.61□□□□□ -1.99
CCDC39-207ENST00000495817 RBM7Q9Y580 266 aaKnown RBP2.61□□□□□ -1.99
CCDC39-207ENST00000495817 PLXNA1Q9UIW2 1896 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 FANCMQ8IYD8 2048 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 INMT-MINDY4F8WBC2 141 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 G3V2T6 193 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CSN2P05814 226 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CCL3P10147 92 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 ZNF25P17030 456 aaPredicted RBP2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CCL1P22362 96 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CRYBB3P26998 211 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 RRAS2P62070 204 aaPredicted RBP2.6□□□□□ -1.99
CCDC39-207ENST00000495817 TBPL1P62380 186 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 GNG5P63218 68 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 HOXC5Q00444 222 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 OR8B8Q15620 311 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 AMTNQ6UX39 209 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 GOLT1AQ6ZVE7 132 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 ZNF767PQ75MW2 155 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 BAP18Q8IXM2 172 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 FAM24BQ8N5W8 94 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 DEFB125Q8N687 156 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 OR8B12Q8NGG6 310 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 OR4D11Q8NGI4 311 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 OR4K15Q8NH41 348 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CCDC115Q96NT0 180 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 TCEAL7Q9BRU2 100 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 RSL24D1Q9UHA3 163 aaKnown RBP2.6□□□□□ -1.99
CCDC39-207ENST00000495817 CCL26Q9Y258 94 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 MUC6Q6W4X9 2439 aa2.6□□□□□ -1.99
CCDC39-207ENST00000495817 PARP14Q460N5 1801 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 TRIOO75962 3097 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 TRAPPC13A5PLN9 417 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 FAM25AB3EWG3 89 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 FAM25CB3EWG5 89 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 FAM25GB3EWG6 89 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 NDUFB2O95178 105 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 IFNGP01579 166 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 RPL7P18124 248 aaKnown RBP2.59□□□□□ -1.99
CCDC39-207ENST00000495817 CTBP2P56545 445 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 DEFA3P59666 94 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 FOXF1Q12946 379 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 JOSD1Q15040 202 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-207ENST00000495817 NEDD8Q15843 81 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 FAM201AQ5SY85 155 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 SCIMPQ6UWF3 145 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 OOSP2Q86WS3 158 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 LRRC28Q86X40 367 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-207ENST00000495817 ACOT12Q8WYK0 555 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 BORCS7Q96B45 105 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 OR52E6Q96RD3 313 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 ULBP3Q9BZM4 244 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 TMEM222Q9H0R3 208 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 OR51I2Q9H344 312 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 LYRM2Q9NU23 88 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-207ENST00000495817 KLK5Q9Y337 293 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-207ENST00000495817 PTPRSQ13332 1948 aa2.59□□□□□ -1.99
CCDC39-207ENST00000495817 COL4A6Q14031 1691 aa2.59□□□□□ -2
CCDC39-207ENST00000495817 TANC1Q9C0D5 1861 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 MYO5AQ9Y4I1 1855 aaKnown RBP2.58□□□□□ -2
CCDC39-207ENST00000495817 UQCRHLA0A096LP55 91 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 A0A0J9YX75 114 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 ARL5CA6NH57 179 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 E7EQ34 232 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 H3BPC8 53 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 DEGS1O15121 323 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 PIAS1O75925 651 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms