RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 FAM87AP0C7U9 286 aa11.88□□□□□ -0.51
UBXN11-215ENST00000494942 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
UBXN11-215ENST00000494942 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
UBXN11-215ENST00000494942 TXN2Q99757 166 aa11.88□□□□□ -0.51
UBXN11-215ENST00000494942 SSBP4Q9BWG4 385 aaPredicted RBP11.88□□□□□ -0.51
UBXN11-215ENST00000494942 ZNF835Q9Y2P0 537 aa11.88□□□□□ -0.51
UBXN11-215ENST00000494942 IGHV1-3A0A0C4DH29 117 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 C20orf202A1L168 122 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
UBXN11-215ENST00000494942 APOBEC3AP31941 199 aaPredicted RBP11.87□□□□□ -0.51
UBXN11-215ENST00000494942 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
UBXN11-215ENST00000494942 BATFQ16520 125 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 RNASEKQ6P5S7 137 aaKnown RBP11.87□□□□□ -0.51
UBXN11-215ENST00000494942 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 OTORQ9NRC9 128 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 SH3BGRL2Q9UJC5 107 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 CNTFRP26992 372 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 OR8B3Q8NGG8 313 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
UBXN11-215ENST00000494942 B9A039 149 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 TEX22C9J3V5 150 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 RBP4P02753 201 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 Q6ZN92 141 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 RNF5Q99942 180 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 A6NNC1 897 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
UBXN11-215ENST00000494942 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
UBXN11-215ENST00000494942 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
UBXN11-215ENST00000494942 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
UBXN11-215ENST00000494942 GOLT1BQ9Y3E0 138 aa11.86□□□□□ -0.51
UBXN11-215ENST00000494942 RP1L1Q8IWN7 2480 aaPredicted RBP11.85□□□□□ -0.51
UBXN11-215ENST00000494942 IGHV3-21A0A0B4J1V1 117 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 IGLC1P0CG04 106 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 APELAP0DMC3 54 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 PSG1P11464 419 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 RBPJQ06330 500 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 LHFPL4Q7Z7J7 247 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 Q8NA96 180 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 ANKRD11Q6UB99 2663 aaPredicted RBP11.85□□□□□ -0.51
UBXN11-215ENST00000494942 TRAV9-2A0A087WT02 112 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 NPIPB6E9PJ23 425 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 LYZP61626 148 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 LEMD1Q68G75 181 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 CHCHD1Q96BP2 118 aaKnown RBP11.85□□□□□ -0.51
UBXN11-215ENST00000494942 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
UBXN11-215ENST00000494942 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
UBXN11-215ENST00000494942 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
UBXN11-215ENST00000494942 Q86TA4 180 aa11.84□□□□□ -0.51
UBXN11-215ENST00000494942 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
UBXN11-215ENST00000494942 RPEQ96AT9 228 aa11.84□□□□□ -0.51
UBXN11-215ENST00000494942 RASL11BQ9BPW5 248 aa11.84□□□□□ -0.51
UBXN11-215ENST00000494942 LAMTOR2Q9Y2Q5 125 aa11.84□□□□□ -0.51
UBXN11-215ENST00000494942 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.51
UBXN11-215ENST00000494942 I3L2K1 104 aa11.83□□□□□ -0.51
UBXN11-215ENST00000494942 CD3EP07766 207 aa11.83□□□□□ -0.51
UBXN11-215ENST00000494942 LCN12Q6JVE5 192 aa11.83□□□□□ -0.51
UBXN11-215ENST00000494942 PGLYRP4Q96LB8 373 aa11.83□□□□□ -0.51
UBXN11-215ENST00000494942 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.51
UBXN11-215ENST00000494942 LINC00614P0C842 121 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 CYB5R2Q6BCY4 276 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 TMEM70Q9BUB7 260 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 GSX1Q9H4S2 264 aaPredicted RBP11.83□□□□□ -0.52
UBXN11-215ENST00000494942 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 PLXNB1O43157 2135 aa11.83□□□□□ -0.52
UBXN11-215ENST00000494942 H3BTX0 84 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 COL8A1P27658 744 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 Q56UQ5 140 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 ZGRF1Q86YA3 2104 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 HOXB4P17483 251 aaPredicted RBP11.82□□□□□ -0.52
UBXN11-215ENST00000494942 URB1-AS1Q96HZ7 61 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
UBXN11-215ENST00000494942 CHEK1O14757 476 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 CRXO43186 299 aaPredicted RBP11.81□□□□□ -0.52
UBXN11-215ENST00000494942 TSPOP30536 169 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 PLGLAQ15195 96 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 ATMQ13315 3056 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 LY6LH3BQJ8 138 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 HAX1O00165 279 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 FOXA3P55318 350 aaPredicted RBP11.81□□□□□ -0.52
UBXN11-215ENST00000494942 DLX1P56177 255 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 BPIFA4PQ86YQ2 179 aa11.81□□□□□ -0.52
UBXN11-215ENST00000494942 TPRP12270 2363 aaKnown RBP11.81□□□□□ -0.52
UBXN11-215ENST00000494942 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms