RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 COX8AP10176 69 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 MAP1LC3CQ9BXW4 147 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 TPSG1Q9NRR2 321 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 RNF7Q9UBF6 113 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
SDF4-207ENST00000494748 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 A0A1W2PPI3 338 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 C5orf17Q8NAS9 161 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 PERPQ96FX8 193 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 BOD1L1Q8NFC6 3051 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 GAGE12BA1L429 117 aa12.27□□□□□ -0.44
SDF4-207ENST00000494748 H3BTX0 84 aa12.27□□□□□ -0.44
SDF4-207ENST00000494748 GPR183P32249 361 aa12.27□□□□□ -0.44
SDF4-207ENST00000494748 Q86TA4 180 aa12.27□□□□□ -0.44
SDF4-207ENST00000494748 GATD1Q8NB37 220 aa12.27□□□□□ -0.44
SDF4-207ENST00000494748 ORM2P19652 201 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 SARAFQ96BY9 339 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 RITA1Q96K30 269 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 Q9H3A6 140 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 FAM87AP0C7U9 286 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 GLRXP35754 106 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 TEX45Q8NA69 505 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 OR1B1Q8NGR6 318 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 OR4A5Q8NH83 315 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
SDF4-207ENST00000494748 A0A096LNJ9 63 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 CIARTQ8N365 385 aaPredicted RBP12.26□□□□□ -0.45
SDF4-207ENST00000494748 RBMXL3Q8N7X1 1067 aaKnown RBP12.26□□□□□ -0.45
SDF4-207ENST00000494748 VPS25Q9BRG1 176 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 KALRNO60229 2985 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 HES3Q5TGS1 186 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 TEX36Q5VZQ5 186 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
SDF4-207ENST00000494748 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
SDF4-207ENST00000494748 HSBP1L1C9JCN9 74 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 TOX4O94842 621 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 APOA2P02652 100 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 ARF6P62330 175 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 ZZEF1O43149 2961 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 DMXL2Q8TDJ6 3036 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 M0R1B8 84 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 JMJD8Q96S16 334 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 TRGV9Q99603 122 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 KLK10O43240 276 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 CCL3L1P16619 93 aa12.25□□□□□ -0.45
SDF4-207ENST00000494748 SPTAN1Q13813 2472 aaKnown RBP12.24□□□□□ -0.45
SDF4-207ENST00000494748 H0Y8G0 127 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 PROCRQ9UNN8 238 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 CD59P13987 128 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 C1orf210Q8IVY1 113 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 PEF1Q9UBV8 284 aaKnown RBP12.24□□□□□ -0.45
SDF4-207ENST00000494748 C7orf71A4D174 169 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 CHEK1O14757 476 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 SAP30O75446 220 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 SMIM15Q7Z3B0 74 aa12.24□□□□□ -0.45
SDF4-207ENST00000494748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
SDF4-207ENST00000494748 SNAI2O43623 268 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 PLP1P60201 277 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 hADV38S2A0JD32 116 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
SDF4-207ENST00000494748 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
SDF4-207ENST00000494748 TMEM116Q8NCL8 245 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 CSN3P07498 182 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDF4-207ENST00000494748 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
SDF4-207ENST00000494748 LOXL1Q08397 574 aaPredicted RBP12.22□□□□□ -0.45
SDF4-207ENST00000494748 FDCSPQ8NFU4 85 aa12.22□□□□□ -0.45
SDF4-207ENST00000494748 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.45
SDF4-207ENST00000494748 TMEM97Q5BJF2 176 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 TMEM200BQ69YZ2 307 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 VSTM2AQ8TAG5 236 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 ARRDC1-AS1Q9H2J1 176 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 TRBV6-1A0A0K0K1D8 114 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 COL8A1P27658 744 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 HCP5Q6MZN7 132 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.45
SDF4-207ENST00000494748 PPIAL4DF5H284 164 aa12.21□□□□□ -0.46
SDF4-207ENST00000494748 SLC25A17O43808 307 aa12.21□□□□□ -0.46
SDF4-207ENST00000494748 SEC11AP67812 179 aa12.21□□□□□ -0.46
SDF4-207ENST00000494748 TIMM23BQ5SRD1 257 aa12.21□□□□□ -0.46
SDF4-207ENST00000494748 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.46
SDF4-207ENST00000494748 DPF1Q92782 380 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms