RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FBN2P35556 2912 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 TRBV9A0A0B4J1U6 114 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 A6NDX4 124 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 UBE2CO00762 179 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 MRPS12O15235 138 aaKnown RBP8.32□□□□□ -1.08
CLCN6-208ENST00000494028 AVPP01185 164 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 SNRPCP09234 159 aaKnown RBP8.32□□□□□ -1.08
CLCN6-208ENST00000494028 COL8A1P27658 744 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 CNN1P51911 297 aaKnown RBP8.32□□□□□ -1.08
CLCN6-208ENST00000494028 TAS2R60P59551 318 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 HIST2H2BCQ6DN03 193 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF502Q8TBZ5 544 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 VN1R17PQ8TDU5 208 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 BLNKQ8WV28 456 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 IMMP2LQ96T52 175 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 Q9H3A6 140 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 CDC42EP3Q9UKI2 254 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 ABCA1O95477 2261 aa8.32□□□□□ -1.08
CLCN6-208ENST00000494028 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 HELTA6NFD8 242 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 G3V318 75 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 H3BTX0 84 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 H3BUX3 64 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 TRGC2P03986 189 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 SLC25A5P05141 298 aaKnown RBP8.31□□□□□ -1.08
CLCN6-208ENST00000494028 NBEAP1P0C6P0 100 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 IGLC2P0DOY2 106 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H1EP10412 219 aaKnown RBP8.31□□□□□ -1.08
CLCN6-208ENST00000494028 GATA3P23771 443 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 ADMP35318 185 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 RHOGP84095 191 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 KCNIP4Q6PIL6 250 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 LINC01356Q8N9X3 169 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 TMEM68Q96MH6 324 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 TXN2Q99757 166 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 TMUB1Q9BVT8 246 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 BEX4Q9NWD9 120 aaPredicted RBP8.31□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 V9GYV3 84 aa8.31□□□□□ -1.08
CLCN6-208ENST00000494028 OR2T8A6NH00 312 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 AP4M1O00189 453 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 ISLRO14498 428 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 SCGB2A1O75556 95 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 GCGP01275 180 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 GPR183P32249 361 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 OR5I1Q13606 314 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 C15orf32Q32M92 178 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
CLCN6-208ENST00000494028 Q86TA4 180 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
CLCN6-208ENST00000494028 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 FRZBQ92765 325 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 CHRDL1Q9BU40 450 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 EPDR1Q9UM22 224 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 RPH3ALQ9UNE2 315 aa8.3□□□□□ -1.08
CLCN6-208ENST00000494028 ANKRD17O75179 2603 aaKnown RBP8.3□□□□□ -1.08
CLCN6-208ENST00000494028 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
CLCN6-208ENST00000494028 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 PGPA6NDG6 321 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 PPP5D1E7EU14 171 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 J3QLI3 93 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 SLC17A3O00476 420 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 FSHBP01225 129 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 S100A6P06703 90 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 RANP62826 216 aaKnown RBP8.29□□□□□ -1.08
CLCN6-208ENST00000494028 LOXL1Q08397 574 aaPredicted RBP8.29□□□□□ -1.08
CLCN6-208ENST00000494028 LY6EQ16553 131 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 TMEM183BQ1AE95 376 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 DEFB113Q30KQ7 82 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 SIGLEC15Q6ZMC9 328 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 BPIFA4PQ86YQ2 179 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 LRRC75A-AS1Q8N1F1 130 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 NHLRC2Q8NBF2 726 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms