RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 WFDC2Q14508 124 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 CT83Q5H943 113 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 RBMXL3Q8N7X1 1067 aaKnown RBP9.4□□□□□ -0.9
HDAC4-210ENST00000493582 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TANC2Q9HCD6 1990 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TMEM189A5PLL7 270 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-210ENST00000493582 LTAP01374 205 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 FXYD2P54710 66 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 OR1L8Q8NGR8 309 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 RND1Q92730 232 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 FAM173AQ9BQD7 235 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 TTTY13Q9BZ97 58 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 CFHR2P36980 270 aa9.4□□□□□ -0.91
HDAC4-210ENST00000493582 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.91
HDAC4-210ENST00000493582 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.91
HDAC4-210ENST00000493582 B4GALT7Q9UBV7 327 aa9.4□□□□□ -0.91
HDAC4-210ENST00000493582 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 DLL1O00548 723 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 FTH1P19P0C7X4 201 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-210ENST00000493582 CKS1BP61024 79 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 OVOL3O00110 214 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 C17orf58Q2M2W7 97 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 RUSC1-AS1Q66K80 236 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 SH2D6Q7Z4S9 175 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-210ENST00000493582 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 DPF1Q92782 380 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 VGLL1Q99990 258 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 ASPMQ8IZT6 3477 aa9.39□□□□□ -0.91
HDAC4-210ENST00000493582 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 TCRAP04437 139 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 FAM201AQ5SY85 155 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 SAP25Q8TEE9 199 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
HDAC4-210ENST00000493582 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-210ENST00000493582 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 CADP27708 2225 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 hADV38S2A0JD32 116 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 CT45A6P0DMU7 189 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 CT45A5P0DMU8 189 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 CT45A7P0DMV0 189 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 ABHD17BQ5VST6 288 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 FMC1Q96HJ9 113 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 C22orf46C9J442 243 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 IGHV1-2P23083 117 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 RPRMLQ8N4K4 120 aa9.38□□□□□ -0.91
HDAC4-210ENST00000493582 SIVA1O15304 175 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 CRYBA4P53673 196 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 ERHP84090 104 aaKnown RBP9.37□□□□□ -0.91
HDAC4-210ENST00000493582 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 SPRNQ5BIV9 151 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 INO80CQ6PI98 192 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-210ENST00000493582 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-210ENST00000493582 Q9H3A6 140 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 SIGLEC8Q9NYZ4 499 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 SERTM2A0A1B0GWG4 89 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 CR1LQ2VPA4 569 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 LGALS9CQ6DKI2 356 aa9.37□□□□□ -0.91
HDAC4-210ENST00000493582 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-210ENST00000493582 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 ZNF414Q96IQ9 312 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-210ENST00000493582 DEFB127Q9H1M4 99 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 INTS1Q8N201 2190 aaKnown RBP9.36□□□□□ -0.91
HDAC4-210ENST00000493582 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 FAM222BQ8WU58 562 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 ARPC1AQ92747 370 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 NDUFA4L2Q9NRX3 87 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 D6R8Y8 96 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 CGB3P0DN86 165 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 CGB7P0DN87 165 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 GCSAMQ8N6F7 178 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 PPP1R35Q8TAP8 253 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
HDAC4-210ENST00000493582 PCSK5Q92824 1860 aa9.36□□□□□ -0.91
HDAC4-210ENST00000493582 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms