RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ARL6IP6Q8N6S5 226 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 SGMS2Q8NHU3 365 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 PYGO2Q9BRQ0 406 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 SLC25A2Q9BXI2 301 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 BEX4Q9NWD9 120 aaPredicted RBP7.9□□□□□ -1.14
PRPF3-206ENST00000493553 C21orf62Q9NYP8 219 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 CDC42EP3Q9UKI2 254 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 MOB4Q9Y3A3 225 aa7.9□□□□□ -1.14
PRPF3-206ENST00000493553 ZFYVE26Q68DK2 2539 aa7.9□□□□□ -1.15
PRPF3-206ENST00000493553 ZZEF1O43149 2961 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 EPG5Q9HCE0 2579 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 IGHV4-61A0A0C4DH41 118 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 FBLL1A6NHQ2 334 aaKnown RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 BRI3O95415 125 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 TYMSP04818 313 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 NBEAP1P0C6P0 100 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 HIST1H1EP10412 219 aaKnown RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 NPPCP23582 126 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 PRB3Q04118 309 aaPredicted RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 FAM209BQ5JX69 171 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 BPIFA4PQ86YQ2 179 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 LRRC75A-AS1Q8N1F1 130 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 TEX29Q8N6K0 151 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 Q8N9W7 124 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 C5orf17Q8NAS9 161 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 NECAP1Q8NC96 275 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 OR4F17Q8NGA8 305 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 OR10G8Q8NGN5 311 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 C2CD4CQ8TF44 421 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 SFRP2Q96HF1 295 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 SAV1Q9H4B6 383 aaPredicted RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 SRD5A3Q9H8P0 318 aa7.89□□□□□ -1.15
PRPF3-206ENST00000493553 MRPL27Q9P0M9 148 aaKnown RBP7.89□□□□□ -1.15
PRPF3-206ENST00000493553 MED13LQ71F56 2210 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 IGHV7-81A0A0B4J1V7 117 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 SERTM2A0A1B0GWG4 89 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 H3BUA1 57 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 K7EQM0 130 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 GGCTO75223 188 aaKnown RBP7.88□□□□□ -1.15
PRPF3-206ENST00000493553 NDUFB8O95169 186 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 S100A8P05109 93 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 PSG1P11464 419 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
PRPF3-206ENST00000493553 LYZP61626 148 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 PDE6HQ13956 83 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 ZNF503Q96F45 646 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 SHANK2-AS3Q9BTD1 123 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 OSTCQ9NRP0 149 aa7.88□□□□□ -1.15
PRPF3-206ENST00000493553 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 WI2-2373I1.2A0A1W2PRP0 233 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 GGTLC3B5MD39 225 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 AP4M1O00189 453 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 PEX7O00628 323 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 ISLRO14498 428 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
PRPF3-206ENST00000493553 CRYBB3P26998 211 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 MEOX2P50222 304 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 KIAA0141Q14154 515 aaPredicted RBP7.87□□□□□ -1.15
PRPF3-206ENST00000493553 CLEC12BQ2HXU8 276 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 Q56UQ5 140 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 TEX38Q6PEX7 206 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 UNQ5815/PRO19632Q6UWF5 114 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 FXYD5Q96DB9 178 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 RNF125Q96EQ8 232 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 FMC1Q96HJ9 113 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 GPR82Q96P67 336 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 SLC25A39Q9BZJ4 359 aaPredicted RBP7.87□□□□□ -1.15
PRPF3-206ENST00000493553 MRPL36Q9P0J6 103 aaKnown RBP7.87□□□□□ -1.15
PRPF3-206ENST00000493553 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 KLF12Q9Y4X4 402 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 URGCP-MRPS24S4R325 110 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 KALRNO60229 2985 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 ABCA1O95477 2261 aa7.87□□□□□ -1.15
PRPF3-206ENST00000493553 SPENQ96T58 3664 aaKnown RBP7.86□□□□□ -1.15
PRPF3-206ENST00000493553 IGHV4-30-2A0A087WSY4 118 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 TRBV6-1A0A0K0K1D8 114 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 FAM223BA6NKX1 122 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 BMPR1BO00238 502 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 RPL7P18124 248 aaKnown RBP7.86□□□□□ -1.15
PRPF3-206ENST00000493553 CD24P25063 80 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 UBE2G1P62253 170 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 LOXL1Q08397 574 aaPredicted RBP7.86□□□□□ -1.15
PRPF3-206ENST00000493553 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 ZNF343Q6P1L6 599 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 ZNF329Q86UD4 541 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 FAM223AQ8IWN6 122 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 OCC1Q8TAD7 63 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 CMTM2Q8TAZ6 248 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 ATG101Q9BSB4 218 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 ELOVL1Q9BW60 279 aa7.86□□□□□ -1.15
PRPF3-206ENST00000493553 EPDR1Q9UM22 224 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms