RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 UBE2L6O14933 153 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 NMUP48645 174 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 H2BFSP57053 126 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 LCN12Q6JVE5 192 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 SPANXA1Q9NS26 97 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 TOMM40O96008 361 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 RPL15P61313 204 aaKnown RBP5.05□□□□□ -1.6
NF1-215ENST00000493220 LMO4P61968 165 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 FOXE3Q13461 319 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 NMSQ5H8A3 153 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 PRNTQ86SH4 94 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 STPG2Q8N412 459 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 SPAG8Q99932 426 aaPredicted RBP5.05□□□□□ -1.6
NF1-215ENST00000493220 TMEM89A2RUT3 159 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 TNFRSF13BO14836 293 aaPredicted RBP5.05□□□□□ -1.6
NF1-215ENST00000493220 IGHV4-59P01825 116 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 TTC9CQ8N5M4 171 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 SGK494Q96LW2 274 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 BBC3Q96PG8 261 aaPredicted RBP5.05□□□□□ -1.6
NF1-215ENST00000493220 LIME1Q9H400 295 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 A0A0U1RRA0 63 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 COX6CP09669 75 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 ZNF585BQ52M93 769 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 LINC00527Q9UJ94 153 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 ZFP30Q9Y2G7 519 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 S4R3C0 116 aa5.05□□□□□ -1.6
NF1-215ENST00000493220 ZNF318Q5VUA4 2279 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 B4DEV8 164 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 TWIST1Q15672 202 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 OR4B1Q8NGF8 309 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 TMEM14BQ9NUH8 114 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 AURKAIP1Q9NWT8 199 aaPredicted RBP5.04□□□□□ -1.6
NF1-215ENST00000493220 ZNRD1Q9P1U0 126 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 IGHV3OR16-12A0A075B7B8 117 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 IGKV1-5P01602 117 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 FREM3P0C091 2139 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 TTC32Q5I0X7 151 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 WFDC11Q8NEX6 87 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 PAM16Q9Y3D7 125 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 PGPA6NDG6 321 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 IGKV1-16P04430 117 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 C22orf34Q6ZV56 151 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 HIST1H2BAQ96A08 127 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 OTOGLQ3ZCN5 2332 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 GOLGB1Q14789 3259 aaKnown RBP5.04□□□□□ -1.6
NF1-215ENST00000493220 ZFHX2Q9C0A1 2572 aaPredicted RBP5.04□□□□□ -1.6
NF1-215ENST00000493220 FAM181BA6NEQ2 426 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 ARL14EPLP0DKL9 152 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 RUNX1Q01196 453 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 OTORQ9NRC9 128 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 NDUFA4L2Q9NRX3 87 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 CPAMD8Q8IZJ3 1885 aa5.04□□□□□ -1.6
NF1-215ENST00000493220 LOC107984156A0A0G2JMH3 177 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 OVOL1O14753 267 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 MMP23AO75900 390 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 GPX1P07203 203 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 HIST1H1AQ02539 215 aaPredicted RBP5.03□□□□□ -1.6
NF1-215ENST00000493220 ARL17AQ8IVW1 177 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 OR9G4Q8NGQ1 327 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 MEGF9Q9H1U4 602 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 SOX21Q9Y651 276 aaPredicted RBP5.03□□□□□ -1.6
NF1-215ENST00000493220 C7orf77A4D0Y5 90 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 FAM74A7A6NL05 159 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 M0QXV9 152 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 FCN3O75636 299 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 AMY1AP04745 511 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 BCL2P10415 239 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 GCHFRP30047 84 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 DAZ1Q9NQZ3 744 aaKnown RBP5.03□□□□□ -1.6
NF1-215ENST00000493220 TRAV3A0A0B4J244 114 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 TMEM189A5PLL7 270 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 H3BQ15 152 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 SNRPCP09234 159 aaKnown RBP5.03□□□□□ -1.6
NF1-215ENST00000493220 SUPT4H1P63272 117 aaKnown RBP5.03□□□□□ -1.6
NF1-215ENST00000493220 MRAPQ8TCY5 172 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 IGHV3-66A0A0C4DH42 116 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 DIRC3C9JPN6 131 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 IGHV3-48P01763 117 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 CXCL2P19875 107 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 CNTFRP26992 372 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 ZNF134P52741 427 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 C10orf55Q5SWW7 151 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 FMC1Q96HJ9 113 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 LINC00574Q9H8X3 128 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 ODF3BA8MYP8 253 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 NDUFB8O95169 186 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 MFAP2P55001 183 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 GAGE1Q13065 139 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 CDSNQ15517 529 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 ZNF329Q86UD4 541 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 C1QL4Q86Z23 238 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 Q8N7P7 452 aa5.03□□□□□ -1.6
NF1-215ENST00000493220 PRSS2P07478 247 aa5.02□□□□□ -1.61
NF1-215ENST00000493220 RNASE2P10153 161 aaKnown RBP5.02□□□□□ -1.61
NF1-215ENST00000493220 Q6YL49 198 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms