RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 RAB5BP61020 215 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 RHOGP84095 191 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 C19orf54Q5BKX5 351 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 SOX21Q9Y651 276 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-216ENST00000492977 ANKRD17O75179 2603 aaKnown RBP10.97□□□□□ -0.65
PTPN7-216ENST00000492977 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 PFN1P07737 140 aaKnown RBP10.97□□□□□ -0.65
PTPN7-216ENST00000492977 CTSGP08311 255 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 IGHV4-31P0DP07 118 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 HIST1H1EP10412 219 aaKnown RBP10.97□□□□□ -0.65
PTPN7-216ENST00000492977 S100PP25815 95 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 ZNF600Q6ZNG1 722 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 C1QL4Q86Z23 238 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 ZNF502Q8TBZ5 544 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
PTPN7-216ENST00000492977 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.65
PTPN7-216ENST00000492977 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 MDFIC2A0A1B0GVS7 189 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 PGPEP1LA6NFU8 196 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 OR2T8A6NH00 312 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 IGF1P05019 195 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 CXCL1P09341 107 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
PTPN7-216ENST00000492977 GNG4P50150 75 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 TAS2R60P59551 318 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 RANP62826 216 aaKnown RBP10.96□□□□□ -0.65
PTPN7-216ENST00000492977 LY6EQ16553 131 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 LEMD1Q68G75 181 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 BPIFA4PQ86YQ2 179 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 BLNKQ8WV28 456 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 SFRP2Q96HF1 295 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
PTPN7-216ENST00000492977 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 TGOLN2O43493 480 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 IGHG2P01859 326 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 S100A7P31151 101 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 RPS10P46783 165 aaKnown RBP10.95□□□□□ -0.66
PTPN7-216ENST00000492977 GALR1P47211 349 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 MAPK1IP1LQ8NDC0 245 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 FAM210BQ96KR6 192 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 PSMG3-AS1Q96PY0 264 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-216ENST00000492977 CDC42EP3Q9UKI2 254 aa10.95□□□□□ -0.66
PTPN7-216ENST00000492977 PGPA6NDG6 321 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 PEX7O00628 323 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 BRI3O95415 125 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
PTPN7-216ENST00000492977 USF2Q15853 346 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-216ENST00000492977 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 PYGO2Q9BRQ0 406 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 EPDR1Q9UM22 224 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 USP9YO00507 2555 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-216ENST00000492977 CRYBG3Q68DQ2 2970 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 KMT2BQ9UMN6 2715 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-216ENST00000492977 ZNF98A6NK75 572 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 FAM223BA6NKX1 122 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 K7EN84 100 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 SLC25A5P05141 298 aaKnown RBP10.94□□□□□ -0.66
PTPN7-216ENST00000492977 ADMP35318 185 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 KCNIP4Q6PIL6 250 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 OR10G8Q8NGN5 311 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 Q96MF0 132 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
PTPN7-216ENST00000492977 PTPN13Q12923 2485 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 CR1P17927 2039 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 FBN2P35556 2912 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 H3BUA1 57 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 FSHBP01225 129 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 GHRHP01286 108 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 CLEC3BP05452 202 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
PTPN7-216ENST00000492977 GPR183P32249 361 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 DEFB112Q30KQ8 113 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 C9orf139Q6ZV77 190 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 ZFP82Q8N141 532 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 LYPD1Q8N2G4 141 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 BTF3L4Q96K17 158 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 MS4A10Q96PG2 267 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 Q9H3A6 140 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 BIN3Q9NQY0 253 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
PTPN7-216ENST00000492977 BMPR1BO00238 502 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
PTPN7-216ENST00000492977 GGCTO75223 188 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms