RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 BTF3P20290 206 aaKnown RBP9.56□□□□□ -0.88
GPNMB-213ENST00000492512 KLF9Q13886 244 aaPredicted RBP9.56□□□□□ -0.88
GPNMB-213ENST00000492512 FCN2Q15485 313 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 ARRDC1Q8N5I2 433 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 PPP1R14BQ96C90 147 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 CACNG5Q9UF02 275 aa9.56□□□□□ -0.88
GPNMB-213ENST00000492512 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
GPNMB-213ENST00000492512 CBY3A6NI87 242 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 ZFP92A6NM28 416 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 A8MTW9 85 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 CDS2O95674 445 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 TSPOP30536 169 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 MEOX2P50222 304 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 LYZP61626 148 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 B2MP61769 119 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 DLK1P80370 383 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 SPCS2Q15005 226 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 NMSQ5H8A3 153 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 AMTNQ6UX39 209 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 TMEM222Q9H0R3 208 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 Q9H3A6 140 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 COMMD3Q9UBI1 195 aa9.55□□□□□ -0.88
GPNMB-213ENST00000492512 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
GPNMB-213ENST00000492512 M0R2Z0 102 aa9.54□□□□□ -0.88
GPNMB-213ENST00000492512 APOA1P02647 267 aa9.54□□□□□ -0.88
GPNMB-213ENST00000492512 ZNF182P17025 639 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-213ENST00000492512 ZNF90Q03938 601 aa9.54□□□□□ -0.88
GPNMB-213ENST00000492512 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
GPNMB-213ENST00000492512 OR13C8Q8NGS7 320 aa9.54□□□□□ -0.88
GPNMB-213ENST00000492512 RBPMSQ93062 196 aaKnown RBP9.54□□□□□ -0.88
GPNMB-213ENST00000492512 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
GPNMB-213ENST00000492512 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 CRXO43186 299 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-213ENST00000492512 DUSP14O95147 198 aaKnown RBP9.53□□□□□ -0.88
GPNMB-213ENST00000492512 CD3DP04234 171 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 FABP1P07148 127 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 ELK1P19419 428 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 AZU1P20160 251 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 CNN1P51911 297 aaKnown RBP9.53□□□□□ -0.88
GPNMB-213ENST00000492512 LSM3P62310 102 aaKnown RBP9.53□□□□□ -0.88
GPNMB-213ENST00000492512 OR11H7Q8NGC8 314 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 TERB2Q8NHR7 220 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 DYNC2LI1Q8TCX1 351 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 GLYATL2Q8WU03 294 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 CACFD1Q9UGQ2 172 aa9.53□□□□□ -0.88
GPNMB-213ENST00000492512 MYCBP2O75592 4640 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 TEX13DA0A0J9YY54 714 aaPredicted RBP9.52□□□□□ -0.89
GPNMB-213ENST00000492512 A0A1W2PPQ1 181 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 PLAC8L1A1L4L8 177 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 TBPP20226 339 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 GALR1P47211 349 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 VBP1P61758 197 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 NCS1P62166 190 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 OR2F1Q13607 317 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 MEF2DQ14814 521 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 SCGB2B2Q4G0G5 96 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 BAP18Q8IXM2 172 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.89
GPNMB-213ENST00000492512 LYPD1Q8N2G4 141 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 S100ZQ8WXG8 99 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 FRZBQ92765 325 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 CCDC59Q9P031 241 aaKnown RBP9.52□□□□□ -0.89
GPNMB-213ENST00000492512 U3KQ87 197 aa9.52□□□□□ -0.89
GPNMB-213ENST00000492512 FAT1Q14517 4588 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 IGKV1D-37A0A075B6S9 117 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 GABARAPH6UMI1 98 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 GAMTQ14353 236 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 ZNF846Q147U1 533 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 Q5VSD8 79 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 LGI3Q8N145 548 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 OR4D10Q8NGI6 311 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 GNPNAT1Q96EK6 184 aaPredicted RBP9.51□□□□□ -0.89
GPNMB-213ENST00000492512 LINC01587Q99440 93 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
GPNMB-213ENST00000492512 C14orf166Q9Y224 244 aaKnown RBP9.51□□□□□ -0.89
GPNMB-213ENST00000492512 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 HPGDSO60760 199 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 HTN1P15515 57 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 OR5I1Q13606 314 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 C16orf74Q96GX8 76 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 NAA60Q9H7X0 242 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 ZNF586Q9NXT0 402 aa9.5□□□□□ -0.89
GPNMB-213ENST00000492512 TIMM8BQ9Y5J9 83 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms