RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	TRAV1-1	A0A0B4J248	108 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423		A0A1W2PPV4	95 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	TEX46	H3BTG2	121 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423		I3L521	148 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	HMGB3	O15347	200 aa	Known RBP	11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	HYPM	O75409	117 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	STAG3L2	P0CL84	134 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	STAG3L3	P0CL85	134 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	CDX1	P47902	265 aa	Predicted RBP	11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	REL	Q04864	619 aa	Predicted RBP	11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	TOMM20L	Q6UXN7	152 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	PBDC1	Q9BVG4	233 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	HRH4	Q9H3N8	390 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	HIGD1A	Q9Y241	93 aa		11.44	□□□□□ -0.58
COPS7B-222	ENST00000492423	IGHV4OR15-8	A0A075B7B6	117 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423		A0A087WW49	117 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423		A0A1B0GV50	99 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423		H3BRN7	92 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	GGCT	O75223	188 aa	Known RBP	11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	FGF8	P55075	233 aa	Predicted RBP	11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	CCL20	P78556	96 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	SFT2D1	Q8WV19	159 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	C4orf3	Q8WVX3	66 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	FAM167A-AS1	Q96KT0	104 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	MED9	Q9NWA0	146 aa		11.43	□□□□□ -0.58
COPS7B-222	ENST00000492423	IGHV3OR16-8	A0A075B7F1	116 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	TRAV5	A0A0B4J249	113 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	NDUFA4	O00483	81 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	HBE1	P02100	147 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	KRTAP10-3	P60369	221 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	KHDC1L	Q5JSQ8	128 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	LINC00305	Q7Z4B0	112 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	C11orf44	Q8N8P7	122 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	WFDC12	Q8WWY7	111 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	ZNF503	Q96F45	646 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	SHANK2-AS3	Q9BTD1	123 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	SCRT1	Q9BWW7	348 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	SLC25A2	Q9BXI2	301 aa		11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.42	□□□□□ -0.58
COPS7B-222	ENST00000492423		A0A1B0GUS0	222 aa		11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	ARL14EPL	P0DKL9	152 aa		11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	C8orf88	P0DMB2	117 aa		11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	UNQ9165/PRO28630	Q6UXU0	137 aa		11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	TMEM190	Q8WZ59	177 aa		11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	CITED2	Q99967	270 aa	Predicted RBP	11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	TECR	Q9NZ01	308 aa	Known RBP	11.41	□□□□□ -0.58
COPS7B-222	ENST00000492423	ADARB2-AS1	A8MUL3	147 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	HSPB1	P04792	205 aa	Known RBP	11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	DEFB136	Q30KP8	78 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	KHDC3L	Q587J8	217 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	IL34	Q6ZMJ4	242 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	COMMD7	Q86VX2	200 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	KLHL30-AS1	Q8NEE0	82 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	TMPRSS5	Q9H3S3	457 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	RABAC1	Q9UI14	185 aa		11.4	□□□□□ -0.58
COPS7B-222	ENST00000492423	CUBN	O60494	3623 aa		11.4	□□□□□ -0.59
COPS7B-222	ENST00000492423	CXorf1	O96002	111 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	GCHFR	P30047	84 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	TAS2R45	P59539	299 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	NDUFA5	Q16718	116 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	LEMD1	Q68G75	181 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	GPHB5	Q86YW7	130 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	SLC7A5P1	Q8MH63	180 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	PFDN2	Q9UHV9	154 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423		U3KQE9	123 aa		11.39	□□□□□ -0.59
COPS7B-222	ENST00000492423	ZNF98	A6NK75	572 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	NUDT19	A8MXV4	375 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	MRPS12	O15235	138 aa	Known RBP	11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	ZNF207	O43670	478 aa	Known RBP	11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	GP9	P14770	177 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	CRYBB3	P26998	211 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	HOXD3	P31249	432 aa	Predicted RBP	11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	RPEL1	Q2QD12	228 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	PQLC2	Q6ZP29	291 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	C8orf86	Q6ZUL3	223 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	REC114	Q7Z4M0	266 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	PRIMA1	Q86XR5	153 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	MARC2	Q969Z3	335 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	C20orf24	Q9BUV8	137 aa		11.38	□□□□□ -0.59
COPS7B-222	ENST00000492423	LINC01619	G3V211	115 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	OR7C2	O60412	319 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	PYY	P10082	97 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	FOXL1	Q12952	345 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	PMS2P11	Q13670	270 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	KRTAP24-1	Q3LI83	254 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	FAM210A	Q96ND0	272 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	DUX3	Q96PT4	197 aa		11.37	□□□□□ -0.59
COPS7B-222	ENST00000492423	DNHD1	Q96M86	4753 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	LOC102723971	A0A1B0GUV8	181 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423		A0A1W2PRX2	142 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	RAB19	A4D1S5	217 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	APOH	P02749	345 aa	Predicted RBP	11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	EDN2	P20800	178 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	PSMB3	P49720	205 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	SLURP1	P55000	103 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	FHL3	Q13643	280 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	AWAT1	Q58HT5	328 aa		11.36	□□□□□ -0.59
COPS7B-222	ENST00000492423	IQCF2	Q8IXL9	164 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms