RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 OR9G4Q8NGQ1 327 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 OR10J5Q8NHC4 309 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 MAFIPQ8WZ33 124 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 ADTRPQ96IZ2 230 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 MGLLQ99685 303 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 C6orf62Q9GZU0 229 aaPredicted RBP1.9□□□□□ -2.11
PHC3-213ENST00000491258 OR2D2Q9H210 308 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 TUBA4BQ9H853 241 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 ZNF430Q9H8G1 570 aaPredicted RBP1.9□□□□□ -2.11
PHC3-213ENST00000491258 TREM1Q9NP99 234 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 EHFQ9NZC4 300 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 KLK9Q9UKQ9 250 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 TPRKBQ9Y3C4 175 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 DNAH7Q8WXX0 4024 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 STAB2Q8WWQ8 2551 aa1.9□□□□□ -2.11
PHC3-213ENST00000491258 DYNC2H1Q8NCM8 4307 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 DNAH1Q9P2D7 4330 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 IGKV1D-13A0A0B4J2D9 117 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SERTM2A0A1B0GWG4 89 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 METTL21EPA6NDL7 271 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 C2orf70A6NJV1 201 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 FAM223BA6NKX1 122 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 E7EUB6 86 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 J3QRK9 145 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 LGALS9O00182 355 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SSX5O60225 188 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 PFDN1O60925 122 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SLC22A5O76082 557 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CRYZL1O95825 349 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 HLA-AP01891 365 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 HLA-DQB1P01920 261 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 PRH1P02810 166 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 IFNA6P05013 189 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CRYGCP07315 174 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CD7P09564 240 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CTXN2P0C2S0 81 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SAA1P0DJI8 122 aaPredicted RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 APELAP0DMC3 54 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 IGKV1-13P0DP09 117 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 RAB3BP20337 219 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 RAB4AP20338 218 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 M6PRP20645 277 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 NFYAP23511 347 aaPredicted RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 GADD45AP24522 165 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 TALDO1P37837 337 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CEBPGP53567 150 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 RAB4BP61018 213 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 POLR2GP62487 172 aaKnown RBP eCLIP1.89□□□□□ -2.11
PHC3-213ENST00000491258 RPL30P62888 115 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 DEFA5Q01523 94 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SPCS2Q15005 226 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 ARL6IP1Q15041 203 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CDK10Q15131 360 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 USF2Q15853 346 aaPredicted RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 TNXAQ16473 311 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 RPEL1Q2QD12 228 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 VMA21Q3ZAQ7 101 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 C10orf55Q5SWW7 151 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 UBE2UQ5VVX9 321 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 HACD4Q5VWC8 232 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 C22orf42Q6IC83 251 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 LCN12Q6JVE5 192 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CNIH2Q6PI25 160 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 ZNF773Q6PK81 442 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 IDO2Q6ZQW0 420 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 C19orf35Q6ZS72 473 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 GPHB5Q86YW7 130 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 FAM223AQ8IWN6 122 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 VKORC1L1Q8N0U8 176 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 PUSL1Q8N0Z8 303 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 DEFB125Q8N687 156 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 NECAP1Q8NC96 275 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 OR2K2Q8NGT1 345 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 TMEM167AQ8TBQ9 72 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 ISOC1Q96CN7 298 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SPIN2AQ99865 258 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SPIN2BQ9BPZ2 258 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 GINS4Q9BRT9 223 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 CCDC90BQ9GZT6 254 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 OR51E2Q9H255 320 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 DCSTAMPQ9H295 470 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 PALMDQ9NP74 551 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 ZC4H2Q9NQZ6 224 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 SLC2A9Q9NRM0 540 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 NDUFB11Q9NX14 153 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 COA4Q9NYJ1 87 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 MRPS7Q9Y2R9 242 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 RBMX2Q9Y388 322 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 PRELID3BQ9Y3B1 194 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 RBM7Q9Y580 266 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 ARHGAP32A7KAX9 2087 aa1.89□□□□□ -2.11
PHC3-213ENST00000491258 HUWE1Q7Z6Z7 4374 aaKnown RBP1.89□□□□□ -2.11
PHC3-213ENST00000491258 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
PHC3-213ENST00000491258 A0A0J9YXY3 114 aa1.88□□□□□ -2.11
PHC3-213ENST00000491258 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
PHC3-213ENST00000491258 TMEM235A6NFC5 223 aa1.88□□□□□ -2.11
PHC3-213ENST00000491258 OR11H12B2RN74 326 aa1.88□□□□□ -2.11
PHC3-213ENST00000491258 PPP5D1E7EU14 171 aa1.88□□□□□ -2.11
PHC3-213ENST00000491258 RBFOX2O43251 390 aaKnown RBP eCLIP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms